I'm trying to find a program or script that can be used to systematically return a list of genes in the genome that fall within …

Hi All, I have a DNA sequence of about 10 kb, and I want to search for retinoic acid response element within that sequence. Can …

I am trying to get all hits against multi sequence fasta file using WEB_BLAST perl script (on Biolinux terminal). When I use blastn or blastp …

[Codondex Blog reports new sequence symmetry][1] One example for a TP53 intron transcript of 400 nucleotides (letters) produced +77,000 subsequence's containing a total 10,735,712 letters. …

i want to do docking of a genes response element with a ligand . so how to do this docking with autodock tool and where …

Codondex developed a unique patterning and scoring algorithm, which analyzes DNA sequences or intron-protein data sets of gene allele/variants. We computed multiple data sets from …

Just launched [www.codondex.com][1] - completely out-of-the-box bioinformatics Compute the order ncDNA regulated a gene's associated protein. Our partition functions identify most and least significant ncDNA …

Hi all, [Here][1] is a new tool for visualization and analysis of miRNA and mRNA dataset. Hope its useful for other researchers in the field. …

Hi all, I am looking for a **command-line** tool to extract varied sequence features, similar to what it is done by [ProFeat][1] (amino acid composition, …

[breseq][1] is a computational pipeline for finding mutations relative to a reference sequence in short-read DNA re-sequencing data for microbial sized genomes. breseq is a …