Command-line sequence feature extraction tool

Question

[miquelduranfrigola]

Hi all,

I am looking for a command-line tool to extract varied sequence features, similar to what it is done by ProFeat (amino acid composition, dipeptide composition, and a long etcetera).

Are you aware of any tool that can be useful to me?

Thanks in advance.

Answer 1

[5heikki]

biopieces?

Answer 2

[Zag]

Did you already check the list of EMBOSS applications? They are divided in groups and there are several groups referring to proteins (2d structure, 3d structure, composition and so on).