This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Download custom track from UCSC genome browser to local

Hello,

Has anyone tried to download a custom track from the UCSC genome browser? I would like to download it so I can visualize and align in IGV.

Any help would be appreciated.

Thank you

genome alignment
• 6,595 views • link
written by sakshi • sakshi

Some are bedgraphs and some are tdf or wig.

• 0 views • link
written by sakshi • sakshi

It's a custom track, meaning you added it yourself?

• 0 views • link
written by WouterDeCoster WouterDeCoster

One of our collaborators uploaded it.

• 0 views • link
written by sakshi • sakshi
  1. Right click on the track
  2. Select Show details for feature...
  3. Go to [track name] track controls
  4. Click on "Update custom track"
  5. If you look in the text box under "Edit configuration", there should be a link right after bigDataurl= that would be the path to your custom track.
• 0 views • link
written by le2336 le2336

0 answers

No answers yet.

Log in to answer this question.

More posts like this