Have you tried release 79 of Ensembl? Manual annotation by HAVANA is also available and merged with the automatic annotation by Ensembl where they are highlighted in gold, e.g. Trim32. If you want the latest assembly, Rnor_6.0 is available already.
I am following the Trinotate pipeline to functionally annotate an IsoSeq transcriptome for a non-model organism. I've performed all of the necessary TransDecoder steps and …
Hi everyone, We did whole-genome sequencing of a disease-model rat. We mapped reads on Rat genome(rn5), and called variants(SNVs, indels, SVs). But we don't know …