reads distribution from the reference
Hi everyone , I want to classify my sequenced reads into introns,exons,,3-UTR,5-UTR,while have no ideas how to Separate it.dose anyone have any ideas? Thanks
Thanks
Alex
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Alex •
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If you have a reference genome available then you align your reads to that reference and then can use a GTF (a gene annotation format file) to assign the mapped reads to their class.
Thanks ,I will try it