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IMG Tables download

Hi everybody! is there any way to download all tables of bacterial species of IMG?

I refer to this table: https://img.jgi.doe.gov/cgi-bin/m/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=2540341180

Thanks!

img

2 answers

Unfortunately there is not, to my knowledge, but I encourage you to use the "Contact Us" link to ask them (since I may be wrong), and to let them know such a feature is desired.

You might have to scrape them manually using beautifulsoup. http://web.stanford.edu/~zlotnick/TextAsData/Web_Scraping_with_Beautiful_Soup.html

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