Extract PDB file names from KEGG when Gene name is known
Dear All,
I am looking for a standalone way to extract pdbs from KEGG when I have the gene name.
For instance, I know "HRAS" gene name. I also know it has pdbs associated to it:
http://www.genome.jp/dbget-bin/www_bget?hsa:3265
Can you please help me know how can I download these pdb file names from KEGG using the gene name?
Thanks much!
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One way was was described in this post:
How Can I Extract Only Specific Structures From Pdb
This post below may also be helpful:
Gene Pathway Association File For Kegg
Since you need KEGG-pathway for your gene, it was described here:
Find Kegg Pathway That Contain Certain Genes