How to get a VCF file for all variants in a specific gene and specific exon?

How to get a VCF file for all variants (single nucleotide variants, insertions/deletions, copy number variants and structural variants) from reference genome (e.g. GRCh38) for a specific gene (e.g. BRCA1) and in specific exon (e.g. 10) ?

Thanks.

snp vcf bed

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updated 6.8 years ago by DNAngel

• written 9.9 years ago by natarajan.padmaja •

1 answer

Have you figured this out? I am also interested!

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written 6.8 years ago by DNAngel

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