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lacb
lacb
Reputation:
120
Joined:
3.8 years ago
Last seen:
10 months ago
Location:
France

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Latest posts by user
0 votes
1 reply
874 views
Strugling on the 3'rule of HGVS
notation hgvs variants
updated by Jeremy Leipzig Jeremy Leipzig • written by lacb • lacb
0 votes
1 reply
1.1K views
What are the risque of keeping variants which read have low mapping quality?
gatk mutect2 bwa variant-calling
updated by Ram Ram • written by lacb • lacb
0 votes
2 replies
2.4K views
Nextflow: how to filter a channel by a list? (DLS2)
dsl2 nextflow
updated by nyoungb2 • nyoungb2 • written by lacb • lacb
0 votes
0 replies
0 views
Comment: Comment: Calling zero mapping quality variant
written by lacb • lacb
2 votes
0 replies
0 views
Answer: Answer: Visualise a variant position in a gene
written by lacb • lacb
0 votes
0 replies
0 views
Comment: Comment: ValueError: not enough values to unpack (expected 2, got 1)
written by lacb • lacb
0 votes
1 reply
0 views
Comment: Comment: What specifications of laptop should I buy for bioinformatics?
written by lacb • lacb
3 votes
1 reply
0 views
Answer: Answer: What specifications of laptop should I buy for bioinformatics?
written by lacb • lacb
0 votes
1 reply
0 views
Answer: Answer: GATK 4.3 configuration
written by lacb • lacb
0 votes
0 replies
0 views
Answer: Answer: extract pattern using grep/sed
written by lacb • lacb
4 votes
0 replies
0 views
Answer: Answer: Eplanation about some code
written by lacb • lacb
0 votes
1 reply
1.0K views
bwa mem duration?
performance mapping bwa
updated by ATpoint ATpoint • written by lacb • lacb
1 vote
1 reply
0 views
Answer: Answer: How to remove reads with no mate? (ERROR:MATE_NOT_FOUND)
written by lacb • lacb
1 vote
3 replies
2.5K views
How to remove reads with no mate? (ERROR:MATE_NOT_FOUND)
bam samtools gatk
updated by wilcas • wilcas • written by lacb • lacb
0 votes
1 reply
1.4K views
Why some reads have MAPQ = 0 with bwa and look good?
alignment mapq bwa maping
updated by acvill • acvill • written by lacb • lacb
0 votes
0 replies
0 views
Comment: Comment: What sequencing/alignment artifact is this?
written by lacb • lacb
0 votes
0 replies
0 views
Comment: Comment: What sequencing/alignment artifact is this?
written by lacb • lacb
0 votes
0 replies
0 views
Comment: Comment: What sequencing/alignment artifact is this?
written by lacb • lacb
0 votes
0 replies
0 views
Comment: Comment: What sequencing/alignment artifact is this?
written by lacb • lacb
0 votes
1 reply
0 views
Comment: Comment: What sequencing/alignment artifact is this?
written by lacb • lacb
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