Further analysis after motif finding?
I have been trying yo analyse the results from the motif analysis I performed with Homer, comparing the motifs in my 2 treatments and finding information about the top motifs.
I was wondering what further analysis can be performed after this?
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Compare it to known motifs in TOMTOM
See this article:
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4763482/