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chiefcat
chiefcat
Reputation:
180
Joined:
9.0 years ago
Last seen:
2.5 years ago
Location:
Sweden
Latest posts by user
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Comment: Comment: DiffBind reports no significant differentially enriched peaks
written by chiefcat chiefcat
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Comment: Comment: DiffBind reports no significant differentially enriched peaks
written by chiefcat chiefcat
1 vote
2 replies
1.7K views
How to obtain low mappability regions from UCSC for deepTools computeGCBias?
deeptools
updated by GenoMax GenoMax • written by chiefcat chiefcat
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2 replies
3.2K views
Any database for downloading cancer cell-lines transcriptome differential expressed gene (DEG) list? (Normal vs cancer cell-lines)
rna-seq deg database cancer microarray
updated by Joseph Hughes Joseph Hughes • written by chiefcat chiefcat
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0 replies
2.2K views
Homer [findMotifsGenome.pl] result interputation.
chip-seq homer motif
written by chiefcat chiefcat
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0 replies
1.5K views
Infer protein function by Gene ontology (ChIP-seq. dataset)
chip-seq gene ontology
written by chiefcat chiefcat
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0 replies
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Comment: C: ChIP-Seq identification of peaks
written by chiefcat chiefcat
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Comment: C: Doubts related to MACS tool
updated by Ram Ram • written by chiefcat chiefcat
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1 reply
2.0K views
Are there any tools which can plot biclustered heatmap on ChIP-seq. signal?
chip-seq heatmap clustering
written by chiefcat chiefcat
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2 replies
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Answer: A: Visualization of ChIP-seq data using Heatmaps (Updated: 06/10/16)
written by chiefcat chiefcat
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1 reply
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Comment: C: [ChIP-seq. signal plot] How to merge ChIP-seq. biological replicates for signal
written by chiefcat chiefcat
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1 reply
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Comment: C: [ChIP-seq. signal plot] How to align the based line of different samples?
written by chiefcat chiefcat
2 votes
7 replies
4.3K views
[ChIP-seq. signal plot] How to align the based line of different samples?
deeptools chip-seq normalization
updated by rls_08 • rls_08 • written by chiefcat chiefcat
0 votes
3 replies
4.7K views
[ChIP-seq. signal plot] How to merge ChIP-seq. biological replicates for signal profile plotting?
deeptools chip-seq biological replicates
updated by Devon Ryan Devon Ryan • written by chiefcat chiefcat
1 vote
1 reply
6.1K views
Input control for ChIP-seq. [Seeking for the clarification between "Library DNA conc.", "no. of raw reads", and "normalization"]
chip-seq normalization sample preperation
updated by Carlo Yague Carlo Yague • written by chiefcat chiefcat
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2 replies
4.9K views
[ChIPSeeker] Getting overlapping genomic feature annotation (e.g. peak locate in gene A & defined TSS region of gene B)
chipseeker annotation chip-seq
updated by Guangchuang Yu Guangchuang Yu • written by chiefcat chiefcat
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Comment: C: Sorting heatmaps by gene expression
written by chiefcat chiefcat
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1 reply
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Comment: C: Sorting heatmaps by gene expression
written by chiefcat chiefcat
0 votes
1 reply
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Comment: C: Sorting heatmaps by gene expression
written by chiefcat chiefcat
0 votes
1 reply
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Comment: C: Sorting heatmaps by gene expression
written by chiefcat chiefcat
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