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Browser of 1000 genome phase 3 showing allele frequency in each population

I am interested in several genes and what to look at their SNP information in different populations from 1000 genome data phase3. I wonder whether there are such browser or tracks showing allele frequency of SNPs in each population (five super populations or 26 subpopulations). Then I can check which SNP show difference among populations, and whether this SNP is in coding region or regulatory regions.

Thanks

snp genome sequence gene
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updated by Giovanni M Dall'Olio Giovanni M Dall'Olio • written by qwzhang0601 qwzhang0601

how about using Exac instead of 1000g ? the information about each population is available in the VCF file.

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written by Pierre Lindenbaum Pierre Lindenbaum

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written by Giovanni M Dall'Olio Giovanni M Dall'Olio

Thanks, this can be useful. But is there a way to show the allele frequencies (of different populations) of all SNPs in a gene (or a region), instead of one specific SNP? Then I can see (by eyes) in a gene where show differences among populations, and then I can take a loser look to such SNPs.

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written by qwzhang0601 qwzhang0601

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