SNP annotation for variants validation.
Hi every one, I appreciate if some one help me to solve my problem. my problem regarding SNP validation. I have a SNP data in vcf file format and I already download the db SNP data set for SNP annotation for validation. this file is in BED file format. can any one suggest me work flow of SNP validation or tools with commands for SNP annotate of my VCF file to BED file? Thanks to all of You.
• 1,565 views
•
link
written
by
rastogi.suraj93 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
How to perform custom annotation using garfield_annotate_uk10k.sh script in GARFIELD tool?
written by bk11 •
-
where can I found ecab3.0 SNP annotation?
written by mary
-
why I miss genes in the annotations?
written by cristina_sabiers
-
problem in annotate my vcf file with another vcf file ??
written by rastogi.suraj93 •
-
compare two vcf files which generate using bcftools
written by rastogi.suraj93 •
-
keep the variants ID after filteration
written by rastogi.suraj93 •
-
variant phred scale of plant genome
written by rastogi.suraj93 •
-
problem in annotate my vcf file to SNPdb files or another vcf file ??
written by rastogi.suraj93 •
-
VCF - Annotation
written by manojkumarbioinfo
-
problem in count SNPs and INDEL
written by rastogi.suraj93 •
Hello rastogi.suraj93!
Questions similar to yours can already be found at:
We have closed your question to allow us to keep similar content in the same thread.
If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.
Cheers!