HIV source bam or cram file for download?

Is there any place where I can download a Whole Exome Sequencing from someone with HIV or other type of viral load?

Thanks!

sequence alignment

• 1,820 views • link

updated 6.7 years ago by Biostar

• written 10.2 years ago by cristina_sabiers

1 answer

Here: http://www.ebi.ac.uk/ena/data/search?query=exome+hiv

• 0 views • link

written 10.2 years ago by GenoMax

More posts like this

how to analyze and summarize multiple whole-exome-sequencing studies
written 7.0 years ago by April •

Hi everyone, there are several similar whole-exome-sequencing studies published in the same disease. I would like to summarize them. However, i don't want to just …
Calculating breadth of coverage for TCGA Whole Exome Sequencing data
written 7.9 years ago by steve

I downloaded a set of .maf files from TCGA, which appear to come from whole exome sequencing datasets (labeled as "WXS"). I need to know …
Mutation calling rules in TCGA
written 9.5 years ago by oriolebaltimore

Dear group members What are the rules to call a mutation/variation in exome or targeted sequencing pipelines of TCGA or any other project. Is there …
Viral load estimation from WXS (whole exome sequencing) data
written 9.6 years ago by akhattri •

Is there any method of estimating number of viral genomes per host genome using whole exome sequencing data. I am specifically interested in HPV which …
Retrieve gen from protein
written 9.9 years ago by cristina_sabiers

Is the first time I look at proteome, I found a pretty interesting place where I can download a few of the results http://humanproteinpedia.org/HuPA_Download/MS/00001.txt Im …
raw data (fastq files) of whole exome sequencing (WES) of somatic mutations
written 9.9 years ago by abedkurdi10 •

Hi all, I am looking for raw data (fastq files) of whole exome sequencing (WES) of somatic mutations to benchmark my GATK-MuTect pipeline. Do you …
Whole Exome Sequencing - Normal Human reference
written 10.1 years ago by mrskkdennen •

I have performed whole exome sequencing on a tumor sample set, and have seen both DNA collected from the buffy coat, and peripheral mononuclear cells …
Aligning unmapped reads to viral genomes
written 10.1 years ago by cristina_sabiers

I found this tutorial pretty interesting, so I put the link to share :) http://www.cureffi.org/2013/01/25/aligning-unmapped-reads-to-viral-genomes/ Thanks at god didn't need to have a heavy pc …
VCF FILE OF DIABETES / HIV / MALARIA OF HUMAN POPULATION
written 11.2 years ago by Being Bioinformatician

Respected members, First question: Do anyone have .fastq and .vcf file(with genotype) of human population (diseased and control set ) especially type 2 diabetes/Malaria/HIV. or …
Mouse exome sequencing: download fastq?
written 11.3 years ago by j-blanchard •

Hi, I would like to study fastq sequences from mouse exome sequencing. Do you know where I can download this type of data? Thank you!