Where to download complete Genbank file?
I want to download the Genbank file of Anabaena variabilis. It's on NCBI http://www.ncbi.nlm.nih.gov/assembly/276508
This organism has:
(i) a chromosome; (ii) 3 plasmids; and (iii) a non-nuclear incision element.
I can download all of these individually but is there a place where ALL of these (or at least the chromosome and plasmids) are within a single Genbank file? It would be nice if the sequence was on there but if not, it's ok I mainly need the features.
Right now, I have to download them individually, put them in a directory, then bash cat * > complete.gbk
There is a Download the full sequence report but that's not what I need.
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You can get the full genome in GenBank format here.
$ grep LOCUS GCA_000204075.1_ASM20407v1_genomic.gbff
LOCUS CP000117 6365727 bp DNA circular BCT 28-JAN-2014
LOCUS CP000119 366354 bp DNA circular BCT 28-JAN-2014
LOCUS CP000120 35762 bp DNA circular BCT 28-JAN-2014
LOCUS CP000121 300758 bp DNA circular BCT 28-JAN-2014
LOCUS CP000118 37151 bp DNA linear BCT 28-JAN-2014
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