Is this SNP inside an intron or extron, or neither?
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Is this SNP inside an intron or extron, or neither?
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2 answers
Dear,
It looks like it is somewhere upstream of the 5' UTR (untranslated region). So it is neither. Try to check where the promotor is.
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Why not check dbSNP?
http://www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi?rs=75168318
NearGene-5 is thefunctional class which means that the SNP is within 2kb 5' to a gene. So as already pointed out, the answer is 'neither'.
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