synonymous vs nonsynonymous substitutions , Ts/tv etc

Hey somebody knows a simple tool for windows to calculate standard statistics for a given alignment like synonymous/nonsynonymous substitutions , transversion / transition ratio etc.... ?

cheers

alignment

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updated 10.3 years ago by dago

• written 10.3 years ago by holzdan •

1 answer

You can try these

Paml: http://abacus.gene.ucl.ac.uk/software/paml.html

kaKs calculator: http://kakscalculator.fumba.me/

• 0 views • link

written 10.3 years ago by dago

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