I used to use `clariomdhumantranscriptcluster.db` package to annotate my Clariom D Human WT Assay, and I found that the gene IDs have many NA values …

Hi everybody, I downloaded some wig files (GRO-seq data) that contains genomic read coverage (merging the two lanes of the same sample). Separate files were …

Hi I am using 'rtracklayer' package in R to import a ".wig" file. Its a Chip-Seq data. After importing I get the SimpleRleList which I …

hello, today I failed to installed methylkit package. > install.packages("methylKit_0.9.2.tar.gz",repos=NULL,type="source") * installing *source* package 'methylKit' ... ** R ** data ** exec ** inst ** …

Hi, all I read a data from wig file with import.wig function of rtracklayer package. The class() of this data showed :"UCSCdata". I am failed …

Hi, all GSEXXXX files were downloaded from GEOdatasets, and then gunzip them. I got some .wig & .tab files, however, I cant read these files …

Hi everybody, I have used KAAS for KEGG annotation of transcriptome assembly, as you may know, it assigned the KO number to the related contigs …

<p>hi all</p> <p>I am working with somatic mutations in prostate, I downloaded the MAF files + clinical data from TCGA and I installed MuSiC to …

I am a very beginner with R, I have been trying to teach myself because I want to use sciClone to visualize tumor heterogeneity from …

<p>Hi all,</p> <p>I am going to use RNAplot (in Vienna RNA package) to draw a figure of my RNA secondary structure. I however, I do …