Running ABSOLUTE on Whole Exome Seq data from Zebrafish samples
I had a question about running ABSOLUTE on whole exome seq data from Zebrafish tumor/normal samples. I want to get information on tumor ploidy and whole genome doublings (using copy number variations and SNP data) in our Zebrafish tumors.
I know ABSOLUTE was created for use with the human genome but I was wondering if it can be made compatible to be used with the Zebrafish genome. Are there ways to do that?
Thank you!
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Has ABSOLUTE been used for any other genomes? (eg: Mouse)?