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fbrundu
fbrundu
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13.3 years ago
Last seen:
8.8 years ago
Location:
European Union

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Latest posts by user
1 vote
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Answer: A: Is cnvkit coverage output split into non-overlapping segments?
written by fbrundu fbrundu
0 votes
2 replies
2.1K views
Is cnvkit coverage output split into non-overlapping segments?
cnvkit coverage exome
updated by Eric T. Eric T. • written by fbrundu fbrundu
1 vote
1 reply
0 views
Comment: C: Compute mean depth coverage for exome data with paired end, overlapping, feature
written by fbrundu fbrundu
0 votes
1 reply
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Comment: C: Compute mean depth coverage for exome data with paired end, overlapping, feature
written by fbrundu fbrundu
1 vote
14 replies
15K views
Compute mean depth coverage for exome data with paired end, overlapping, features
coverage bam depth exome
updated by Kiran Kiran • written by fbrundu fbrundu
0 votes
0 replies
2.3K views
TruSeq Exome Kit bed file old version
bed whole-exome-sequencing
updated by Ram Ram • written by fbrundu fbrundu
1 vote
0 replies
0 views
Comment: C: CNVkit calling strategies with matched-normal tumor
written by fbrundu fbrundu
0 votes
1 reply
0 views
Comment: C: CNVkit calling strategies with matched-normal tumor
written by fbrundu fbrundu
0 votes
4 replies
3.3K views
CNVkit calling strategies with matched-normal tumor
cnvkit copy-number-variation whole-exome
updated by Kevin Blighe Kevin Blighe • written by fbrundu fbrundu
0 votes
0 replies
2.3K views
Which data format for mRNA expression matrix is necessary to run pathway analysis with Paradigm?
gene-expression pathway paradigm mrna
updated by Ram Ram • written by fbrundu fbrundu
1 vote
1 reply
2.6K views
What is the control level of activation in Paradigm?
paradigm gene-expression pathway mrna
updated by Ram Ram • written by fbrundu fbrundu
1 vote
1 reply
2.9K views
How to aggregate multiple copy number variation profiles or select the best one for one sample
copy-number-variation tcga rna-seq
updated by Ram Ram • written by fbrundu fbrundu
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0 replies
0 views
Comment: Comment: How to select genes before log2 ratio on a RNASeq gene expression matrix, based
updated by Ram Ram • written by fbrundu fbrundu
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0 replies
0 views
Comment: Comment: How to select genes before log2 ratio on a RNASeq gene expression matrix, based
updated by Ram Ram • written by fbrundu fbrundu
0 votes
1 reply
0 views
Comment: Comment: How to select genes before log2 ratio on a RNASeq gene expression matrix, based
updated by Ram Ram • written by fbrundu fbrundu
2 votes
7 replies
6.1K views
How to select genes before log2 ratio on a RNASeq gene expression matrix, based on signal median
log-ratio expression rna-seq feature-selection
updated by Ram Ram • written by fbrundu fbrundu
0 votes
1 reply
0 views
Comment: C: How to download a full matrix of gene expression of a TCGA dataset
written by fbrundu fbrundu
4 votes
6 replies
24K views
How to download a full matrix of gene expression of a TCGA dataset
tcga gene expression cancer samples
updated by Andy Andy • written by fbrundu fbrundu
0 votes
1 reply
5.2K views
Is LOESS normalization done to each sample independently?
loess normalization microarray regression
updated by karl.stamm karl.stamm • written by fbrundu fbrundu
0 votes
0 replies
0 views
Comment: C: How to test the robustness and the performance of a novel classification algorit
written by fbrundu fbrundu
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