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geneart$$
geneart$$
Reputation:
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Joined:
12.3 years ago
Last seen:
4.2 years ago
Location:
United States
Latest posts by user
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Comment: Comment: reference fasta creation
written by geneart$$ • geneart$$
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Comment: Comment: reference fasta creation
written by geneart$$ • geneart$$
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Comment: Comment: reference fasta creation
written by geneart$$ • geneart$$
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Comment: Comment: reference fasta creation
written by geneart$$ • geneart$$
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9 replies
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reference fasta creation
reference mapping fasta
written by geneart$$ • geneart$$
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Comment: Comment: Understanding GATK evaluation metrics
written by geneart$$ • geneart$$
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Comment: C: Understanding GATK evaluation metrics
written by geneart$$ • geneart$$
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Comment: C: RNAseq normal matches using publicly available databases
written by geneart$$ • geneart$$
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2 replies
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RNAseq normal matches using publicly available databases
rna-seq tcga dge normal tumor
updated by ATpoint ATpoint • written by geneart$$ • geneart$$
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Comment: C: classifying samples by TCGA signature
written by geneart$$ • geneart$$
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Comment: C: VariantToTable not calling HET HOM etc
written by geneart$$ • geneart$$
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1 reply
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Comment: C: VariantToTable not calling HET HOM etc
updated by Kevin Blighe Kevin Blighe • written by geneart$$ • geneart$$
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Comment: C: VariantToTable not calling HET HOM etc
written by geneart$$ • geneart$$
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5 replies
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VariantToTable not calling HET HOM etc
gatk variantstotable
updated by Ram Ram • written by geneart$$ • geneart$$
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Answer: A: Variant filtration on lowGQ values
written by geneart$$ • geneart$$
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Comment: C: Variant filtration on lowGQ values
written by geneart$$ • geneart$$
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3 replies
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Variant filtration on lowGQ values
gatk genotype filtering
written by geneart$$ • geneart$$
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1 reply
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GATK VQSR output
gatk applyvqsr
updated by Sd • Sd • written by geneart$$ • geneart$$
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Answer: A: Is it possible to use VariantRecalibrator with only one sample? (90,000 MuTect2
written by geneart$$ • geneart$$
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Answer: A: How Do I Use Variantfiltration To Filter By Vqslod And/Or The Tranches?
written by geneart$$ • geneart$$
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