More posts like this
-
Brain cell type deconvolution
written by rodd 26Hi all! I am interested in understanding the % of main cell types composing my bulk RNA-seq data from brain (e.g., astrocytes, microglia, neurons, oligodendrocytes). …
-
public pbmc database
written by GiuliaAC 2Hi! Could you please suggest me where I can find a public database of pbmc RNA seq data which also provides patients' information (survival etc.)? …
-
modeling a PEG
written by marco23.p 2I need to model a PEG 3000 and cannot find any such structure (I searched in the pdb, and could only find smaller molecules) I'm …
-
RNA seq Case Study dataset for differential expression analysis tool validation
written by zamanys4 1I have developed a tool for differential expression analysis of RNA seq data and now I am looking for a paper with biological experiments relying …
-
How to findout RNA seq data of normal Human ovarian epithelial tissue?
written by jiffyjohn23 1Hello everyone, I have been trying to download the **RNA seq data of a normal Human ovarian epithelial tissue** from GEO and SRA. But I …
-
Visualization of local secondary structure alignment for RNA
written by marco23.p 2Hello everybody, is there a way -of which I'm not aware- to visualize a local alignment (or global at least) of RNA secondary structures? Something …
-
ALL RNA-seq publicly available data
written by a.james 24Hello All, I need to do a correlation study with publicly available ALL RNA-seq data samples with in house RNA-seq sample (a single patient sample …
-
How to retrieve all the possible RNA-seq data sets from public data bases?
written by Jaan 0Hi I have a task which I have to collect every possible sets of RNA-seq data from a public database (GEO, ArrayExpress, etc) for Arabidopsis …
-
Rna-Seq Datasets From Genetic Association Studies?
written by matted 779<p>Are there public or semi-public RNA-seq datasets on groups of individuals with matched phenotype data? Humans or model organisms would both be useful.</p> <p>For example, …
-
How Do I Read A Maf File From File Into Pygr
written by KCC 409<p>I have looked through the manual and it seems to concentrate a lot on using data from an online database, but I could find anything …