public pbmc database
Hi! Could you please suggest me where I can find a public database of pbmc RNA seq data which also provides patients' information (survival etc.)?
Thank you
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GiuliaAC •
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Survival from what? There are tons of PBMC data sets. More info is needed to determine what you want.
You're right. Patient could be affected by cancers (any type)
https://singlecell.broadinstitute.org/single_cell/study/SCP424/single-cell-comparison-pbmc-data#study-visualize
You can also search SRA using
sra-explorerbut the public patient data is going to be the difficult part.