Hi!
I develop an application and I will query microrna in The mirwalk 2.0.
I haven't found any information it's site about a client-side application, web service API, or python or R tool to search microrna and get all the data found.
Does anyone know whether there is a library, web service AP or client-side for mirwalk 2.0?
Thank to very much!
Carlos Marchi
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written
by
cmarchi83 •
1 answer
I can think of two options:
In the miRWalk2.0 website, under the holistic view you can download the entire data.
There is an R package called SpidermiR where you can give the list of miRNAs and get either a list of validated targets or a list of predicted targets (only from 4 different available tools). The functions of interests are:
SpidermiRdownload_miRNAprediction(), andSpidermiRdownload_miRNAvalidate(). However, you can read the vignette and maybe find other options as well.
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