This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Lositan freezing after starting the analysis

Hi everyone,

I am trying to run Lositan for 2 populations with n=100 or so and 17,000 SNP loci. For some reason Lositan freezes at this stage: "First simulation pass to determine neutral set". Any idea why and how I could sort it out?

I am running it on a Mac.

Cheers

Nic

lositan

im guessing apparently thats a bug that sometimes happens when using two populations. same thing when I subselect 2 pops out of 4 in my genepop file, it does work on another older and slower computer, probably a version issue

0 answers

No answers yet.

Log in to answer this question.