Mapping KEGG pathway names to IDs using KEGG.db package
Hi,
I am trying to convert a list of KEGG pathway name to corresponding KEGG IDs.
To do that, I am using KEGG.db, Version 3.1.2. It seems that this package is not complete, for example one of the KEGG pathways is "Adrenergic signaling in cardiomyocytes" with ID= 'hsa04261', which there is not available in this package?!
I am using the below code:
library(KEGG.db)
keggid2name <- as.list(KEGGPATHID2NAME)
keggid2name["04261"]
Do you have any idea about where can I get complete list of pathway names and IDs using R?
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