Biostar Beta. Not for public use.
GEM mappability > wig/bedgraph : how to interprete
0
Entering edit mode
20 months ago
Canada

Hello

I have used gem mappability software to convert their encoded fasta format to wiggle and bedgraph.

However I understand that while their values in the encoded FASTA format ranges to thousands, in bedgraph, as expected, these values are ranging between 0-1.

I was not able to find any documentation on how to interprete these values.

For example, if I intend to call some regions of the genome as _unmappable_ , what threshold I should use, etc.

Thanks

ADD COMMENTlink

Login before adding your answer.

Similar Posts
Loading Similar Posts
Powered by the version 2.3.1