Quality Control And Flow Of 4C-Seq Data
Sir, I am working on 4c-seq analysis and the fastqc report which I am getting shows lot of duplication.for some of the sequences.The per base quality score is very good.How to go about the using fastx tool kit on these sequences?Can we use collapser on the fastq file.How can we deduce wiggle track file for downstream analysis.how is coverage Bedgraph similar to wiggle and what tools can be used for their deduction from bam files
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