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Any tools to predict non-coding driver mutations

Hi,

I am looking for a tool to predict functional mutations in non-coding region to drive cancer progression.

Do you know any tools/software? Most tools I see are for protein-coding regions.

Thank you.

wgs
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updated by Ram Ram • written by Ming Tommy Tang Ming Tommy Tang

1 answer

I've used FunSeq. I'm not sure it if really the best, but I think it gave non-random enrichment. Also, there is a FunSeq2, which I haven't tried.

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updated by Ram Ram • written by Charles Warden Charles Warden

I have heard about it, will try it out! Thanks

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updated by Ram Ram • written by Ming Tommy Tang Ming Tommy Tang

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