Non-coding DNA structure prediction recomendation
Dear expert colleagues, As a genomicist, my knowledge regarding predicting the 3D structure of non-coding DNA and RNA is very limited. While I know a few popular servers/pipelines for basic RNA secondary structure prediction, I would like to seek your kind recommendation on the new developments since I know there are many other tools available that I am unaware of. My goal is to predict the most likely structure of a short non-coding DNA in a basic way. Thank you in advance for any suggestion
1 answer
There is a Vector Builder website where you can input your DNA sequences. It will predict structure for you input DNA.
https://en.vectorbuilder.com/tool/dna-secondary-structure.html
Log in to answer this question.
More posts like this
-
Evolutionary based RNA secondary structure prediction software
written by Sergey_Fin •
-
Choosing tool for DNA secondary structure stem-loop prediction
written by Anand Rao
-
RNA structure prediction-BLAST alignment to multiple sequence alignment
written by d.awwad19 •
-
News: Course: Variant effect prediction, 31th October - 3th November 2017
written by si.vanheel-vauhkala •
-
How ViennaRNA Package deal with character other than AUGC in RNA secondary structure prediction?
written by wyj.jackson •
-
Structure prediction on DNA folding form or RNA folding form
written by The Last Word
-
Forum: Designing DNA with certain properties, needs access to resource for evaluation and itteratio…
written by stian.a.weiseth •
-
Maximum distance between paired bases in secondary structure prediction
written by tomas.iesmantas •
-
Modifying Existing Approach In Protein Structure Research Area
written by GreenDiamond
-
Identified Potential Non-Coding Rna, And Then?
written by Michael Dondrup
