RNA-seq for ncRNA analysis in Rice
Could anyone kindly suggest some protocols on analyzing ncRNA using RNA-seq data, articles published on identifying and analyzing Plants ncRNA will be equally of great help.
Thanks
next-gen-sequencing
blast
rna-seq
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tophat2 cufflinks cuffcompare pipeline would be good to start with
Thanks Manu, have been trying to find more resources on analyzing all plants ncRNA molecules invain..mean while like you say will start with http://www.biomedcentral.com/1471-2105/13/331/figure/F1...if u come across more precise articles published don`t hesitate to update me.