Extract sequences from genome
2 answers
Copy/paste the sequences over into a pairwise alignment tool: http://www.ebi.ac.uk/Tools/psa/
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Ram
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written
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Istvan Albert
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written
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Istvan Albert
Same idea, on the other side of the ocean (at NCBI) with the blast engine:
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Do you have both ACCESSION NUMBERs for those mRNA?
It would be better if you can elaborate little more about your problem? For example, why you want to blast it against 20nt of human mRNA?
Thank you, All