I am unable to figure out what my reference should be to be used for the hivmmer tool (version 0.1.2) for HIV genotyping. I tried …

Hello everyone I'm trying to do pharmacophore search with MOE. I have generated conformations with openeye but when I read the .oeb file and conducting …

Hi everyone, I need to convert a BAM to a FASTA. BAM file generated by BW aligner. I need forward and reverse sequences separately in …

Hello there everyone. I have been looking all over the internet looking for a code to convert a genbank file to a fasta file. Also, …

I'm trying to convert a BAM file to a BIGWIG file on my mac using the following link: https://github.com/chapmanb/bcbb/blo...m_to_wiggle.py Could someone explain what commands I …

<p>how to know the mapping rate from .sam file generated by a mapper?<br /> do I use</p> <p><strong>samtools flagstat file.sam</strong><br /> Can you help me?</p> …

Hi All I have got mitochondrial sequences in fasta format which I need to submit in ENA. I need to functionally annotated it and submit …

<p>Hi I have a bcf file generated using bcftools(samtools), which I further wanted to convert to vcf format. I used the following command:</p> <pre><code>bcftools view …

<p>As part of a project, I need to use cistrome Galaxy to convert Entrez IDs to genomic intervals. I uploaded the EntrezID list in tabular …

<blockquote> <p><strong>Possible Duplicate:</strong> <br/> <a href="http://biostar.stackexchange.com/questions/6993/convert-bam-file-to-fasta-file">Convert bam file to fasta file</a> </p> </blockquote> <p>Can we convert a whole human genome bam file into fasta format. …