Graphlet degree vectors (signatures)
Dear all,
I need a R code for count Graphlet degree vectors (signatures) of network nodes.
Thanks
gdv
• 2,798 views
•
link
updated
by
Ram
•
written
by
mahdijalili •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
What would the assortativity of a putative mirobial interaction network tell you in an evological s…
written by robert.murphy •My understanding of assortativity is it is a measure of how much similar node cluster in such a network, such as high degree nodes clustering …
-
Cytoscape X MENA
written by vmrego31 •Good Morning, I am using NetworkAnalyzer to analyze my network data, however when displaying them I am not able to associate them with the data …
-
Could any of you help me to explain the steps in creating backbone network or the steps in validati…
written by sasmbi06 •I am doing my work in protein protein interaction network and I have constructed PPI using STRING database and Cytoscape software. But i need to …
-
Protein protein network analysis
written by Liftedkris •During protein protein network interaction analysis, we have in-degree and out-degree and we also have EdgeCount. Please in calculating the hub nodes, which of the …
-
Compare the degree distribution of a real networks and multiple random networks
written by The Last WordBefore the paper real world networks are rarely scale free, studies used to (still do) check for the slope in degree distribution graphs and if …
-
Selection of hub gene on the basis of node degree
written by Santosh •I have 189 nodes (including up- and down-regulated genes and other genes) with edges 1157 in my network using Cytoscape v.3.6.0. My network has a …
-
Threshold for centrality score during prediction of Hub genes in co expression network
written by Omics data miningDear all, I am working on analysis of weighted co-expression network. My next step is to measure network topology in terms of betweeness , closeness …
-
microRNA database for saccharomyces cerevisiae
written by mahdijalili •Dear all, Does it exist microRNA database for saccharomyces cerevisiae? Thanks.
-
No common nodes between Three centrality measure of PPI network in top 200 nodes
written by beingseema03 •Hi all, I am using mentha database for analyzing PPI networks. I have find the three centrality measures Degree,Closeness and betweenness centrality. Then I have …
-
R - Merge 2 network with different color nodes
written by Bioinformatist NewbieHi, I want to merge 2 networks but I want different color of their node. For example N1's vertices should be represented with color "Red" …
What about this?
Thanks mikhail, but a pure R script preferred.
ergm.graphletswrite with c.