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subset bead chip (ovine 50K illumina)
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16 months ago

Hello, I want to work with beadchip SNPs data (50,000 SNPs from ovine illumina beadchip). I want to extract from a set of SNPs/population a subset of 100SNPs filtered by polymorphism and searching by omogeneus chromosome distribution (2-3 for chromosome) to use for parentage testing. there are some R script or any tools I can use?

Thank you very much for any help

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