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4
votes
4
replies
2.2k
views
Variant calling from FASTA file
bwa
bowtie
fasta
vcf
3.6 years ago by
User000
▴ 700
0
votes
0
replies
2.2k
views
Comment:
C: Variant calling from FASTA file
3.6 years ago by
User000
▴ 700
0
votes
0
replies
2.2k
views
Comment:
C: Variant calling from FASTA file
3.6 years ago by
User000
▴ 700
0
votes
0
replies
2.6k
views
Comment:
C: GATK variant calling on multiple bam files
3.6 years ago by
User000
▴ 700
1
vote
1
reply
2.6k
views
Comment:
C: GATK variant calling on multiple bam files
3.6 years ago by
User000
▴ 700
0
votes
2
replies
2.6k
views
Comment:
C: GATK variant calling on multiple bam files
3.6 years ago by
User000
▴ 700
5
votes
7
replies
2.6k
views
GATK variant calling on multiple bam files
gatk
bam
3.6 years ago by
User000
▴ 700
2
votes
7
replies
2.3k
views
Freebayes variant calling understanding
freebayes
SNP
updated 3.6 years ago by
Biostar
20 • written 4.2 years ago by
User000
▴ 700
0
votes
0
replies
669
views
Merging the libraries
BAM
merge
readgroupname
3.7 years ago by
User000
▴ 700
0
votes
1
reply
2.5k
views
Comment:
C: Samtools merge BAM files using snakemake
3.8 years ago by
User000
▴ 700
0
votes
0
replies
2.5k
views
Comment:
C: Samtools merge BAM files using snakemake
3.8 years ago by
User000
▴ 700
0
votes
1
reply
2.5k
views
Comment:
C: Samtools merge BAM files using snakemake
3.8 years ago by
User000
▴ 700
0
votes
1
reply
2.5k
views
Comment:
C: Samtools merge BAM files using snakemake
3.8 years ago by
User000
▴ 700
0
votes
1
reply
2.5k
views
Comment:
C: Samtools merge BAM files using snakemake
3.8 years ago by
User000
▴ 700
0
votes
1
reply
2.5k
views
Comment:
C: Samtools merge BAM files using snakemake
3.8 years ago by
User000
▴ 700
0
votes
1
reply
2.5k
views
Comment:
C: Samtools merge BAM files using snakemake
3.8 years ago by
User000
▴ 700
5
votes
14
replies
2.5k
views
Samtools merge BAM files using snakemake
samtools
snakemake
bam
updated 3.8 years ago by
Devon Ryan
104k • written 3.8 years ago by
User000
▴ 700
0
votes
1
reply
3.0k
views
Comment:
C: Replace heterozygous GT to missing in vcf file using bcftools
3.9 years ago by
User000
▴ 700
0
votes
1
reply
3.0k
views
Comment:
C: Replace heterozygous GT to missing in vcf file using bcftools
3.9 years ago by
User000
▴ 700
1
vote
6
replies
3.0k
views
Replace heterozygous GT to missing in vcf file using bcftools
bcftools
vcf
3.9 years ago by
User000
▴ 700
0
votes
0
replies
1.5k
views
Comment:
C: It is possible to get gzipped fastq.gz files as output in SABRE?
3.9 years ago by
User000
▴ 700
0
votes
0
replies
1.5k
views
Comment:
C: It is possible to get gzipped fastq.gz files as output in SABRE?
3.9 years ago by
User000
▴ 700
0
votes
0
replies
1.5k
views
Comment:
C: It is possible to get gzipped fastq.gz files as output in SABRE?
3.9 years ago by
User000
▴ 700
0
votes
1
reply
1.5k
views
Comment:
C: It is possible to get gzipped fastq.gz files as output in SABRE?
3.9 years ago by
User000
▴ 700
0
votes
0
replies
1.5k
views
Comment:
C: It is possible to get gzipped fastq.gz files as output in SABRE?
3.9 years ago by
User000
▴ 700
4
votes
8
replies
1.5k
views
It is possible to get gzipped fastq.gz files as output in SABRE?
sabre
demultiplex
updated 3.9 years ago by
Pierre Lindenbaum
162k • written 3.9 years ago by
User000
▴ 700
0
votes
0
replies
3.9k
views
Comment:
C: Bedtools intersect with header file
3.9 years ago by
User000
▴ 700
1
vote
0
replies
4.9k
views
Comment:
C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
4.0 years ago by
User000
▴ 700
0
votes
0
replies
751
views
Freebayes adjusting parameters to "force" homozygous call
freebayes
variant calling
updated 4.0 years ago by
Biostar
20 • written 4.2 years ago by
User000
▴ 700
1
vote
1
reply
4.9k
views
Comment:
C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
4.0 years ago by
User000
▴ 700
1
vote
1
reply
4.9k
views
Comment:
C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
4.0 years ago by
User000
▴ 700
1
vote
0
replies
5.5k
views
Comment:
C: What is the most optimal way to count the nucleotide bases of each fastq file in
4.0 years ago by
User000
▴ 700
1
vote
1
reply
4.9k
views
Comment:
C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
4.0 years ago by
User000
▴ 700
1
vote
1
reply
4.9k
views
Comment:
C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
4.0 years ago by
User000
▴ 700
0
votes
0
replies
5.5k
views
Comment:
C: What is the most optimal way to count the nucleotide bases of each fastq file in
4.1 years ago by
User000
▴ 700
0
votes
1
reply
5.5k
views
Comment:
C: What is the most optimal way to count the nucleotide bases of each fastq file in
4.1 years ago by
User000
▴ 700
1
vote
1
reply
4.9k
views
Comment:
C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
4.1 years ago by
User000
▴ 700
2
votes
1
reply
4.9k
views
Comment:
C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
4.1 years ago by
User000
▴ 700
9
votes
16
replies
4.9k
views
Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
freebayes
beagle
updated 16 months ago by
yzliu01
▴ 10 • written 4.1 years ago by
User000
▴ 700
1
vote
11
replies
1.3k
views
Extract several columns from a VCF file
vcf
updated 4.2 years ago by
tacrolimus
▴ 140 • written 4.2 years ago by
User000
▴ 700
0
votes
1
reply
2.3k
views
Comment:
C: Freebayes variant calling understanding
4.2 years ago by
User000
▴ 700
1
vote
1
reply
1.3k
views
Answer:
C: Extract several columns from a VCF file
4.2 years ago by
User000
▴ 700
0
votes
1
reply
1.3k
views
Comment:
C: Extract several columns from a VCF file
4.2 years ago by
User000
▴ 700
0
votes
1
reply
1.3k
views
Comment:
C: Extract several columns from a VCF file
4.2 years ago by
User000
▴ 700
0
votes
1
reply
1.3k
views
Comment:
C: Extract several columns from a VCF file
4.2 years ago by
User000
▴ 700
0
votes
1
reply
2.3k
views
Comment:
C: Freebayes variant calling understanding
4.2 years ago by
User000
▴ 700
0
votes
0
replies
2.3k
views
Comment:
C: Freebayes variant calling understanding
4.2 years ago by
User000
▴ 700
1
vote
0
replies
1.8k
views
Answer:
A: Bedtools intersect/bcftools annotate dublicate the SNPs
4.2 years ago by
User000
▴ 700
3
votes
8
replies
1.8k
views
Bedtools intersect/bcftools annotate dublicate the SNPs
bcftools
bedtools
SNP
4.2 years ago by
User000
▴ 700
4
votes
1
reply
2.6k
views
Bcftools filtering only 10% missing and heterozygous calls
bcftools
4.2 years ago by
User000
▴ 700
393 results • Page
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