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questions
1
vote
6
replies
529
views
Quest about the input data for PCA analysis
PCA
6 weeks ago by
tujuchuanli
▴ 100
4
votes
4
replies
546
views
Question about identification of DEGs in paired sample using edgeR
edgeR
DEG
3 months ago by
tujuchuanli
▴ 100
0
votes
2
replies
1.9k
views
Question about REDItools
REDItools
updated 7 months ago by
Ethan Lee
• 0 • written 4.7 years ago by
tujuchuanli
▴ 100
1
vote
2
replies
1.0k
views
How to display gene expression after Harmony correction in scRNA-seq analysis
scRNA-seq
correction
Harmony
6 weeks ago by
tujuchuanli
▴ 100
1
vote
3
replies
1.0k
views
Single sample GSEA analysis
single
sample
updated 15 months ago by
jv
★ 1.8k • written 15 months ago by
tujuchuanli
▴ 100
0
votes
0
replies
506
views
question on scRNA-seq data integration
scRNA-seq
integrate
16 months ago by
tujuchuanli
▴ 100
1
vote
10
replies
2.7k
views
Weird results for scRNA-seq
scRNA-seq
GEO
updated 16 months ago by
Giuseppe
▴ 70 • written 16 months ago by
tujuchuanli
▴ 100
1
vote
2
replies
948
views
Some questions about the CPTAC data processing
programming
genomics
protein
3.1 years ago by
tujuchuanli
▴ 100
1
vote
5
replies
1.3k
views
question about survival analysis
survival analysis;interaction
updated 3.6 years ago by
Biostar
20 • written 5.4 years ago by
tujuchuanli
▴ 100
0
votes
1
reply
992
views
How to identify down-regulated genes in monocle
scRNA-seq
monocle
DEGs
4.0 years ago by
tujuchuanli
▴ 100
0
votes
4
replies
979
views
How to classify cells based on the expression of genes in scRNA-seq
scRNA-seq
expression
4.0 years ago by
tujuchuanli
▴ 100
1
vote
1
reply
4.8k
views
Is the upregulation of ribosome genes in scRNA-seq reliable?
RNA-Seq
scRNA-seq
ribosome gene
4.1 years ago by
tujuchuanli
▴ 100
0
votes
2
replies
1.0k
views
Question about scRNA-seq analysis
scRNA-seq
4.2 years ago by
tujuchuanli
▴ 100
1
vote
5
replies
2.5k
views
Question about the type of SRA data (SRR9713131, single- or pair-end?)
scRNA-seq
4.3 years ago by
tujuchuanli
▴ 100
2
votes
6
replies
1.7k
views
question about isoform switching searching tools
isoform switching iso-ktsp
updated 4.3 years ago by
mihizawi
▴ 20 • written 5.6 years ago by
tujuchuanli
▴ 100
0
votes
2
replies
1.1k
views
question about mean of the squares of CNA values in scRNA-seq
scRNA-seq
4.4 years ago by
tujuchuanli
▴ 100
2
votes
6
replies
2.6k
views
Question about scRNA-seq
RNA-Seq
updated 4.4 years ago by
jared.andrews07
★ 16k • written 4.4 years ago by
tujuchuanli
▴ 100
0
votes
4
replies
1.6k
views
can I use soft-clip RNA-seq reads to summarize gene counts?
RNA-seq
4.6 years ago by
tujuchuanli
▴ 100
0
votes
0
replies
704
views
How to export genes with conectivity and cluster identifier in WGCNA analysis
WGCNA
4.6 years ago by
tujuchuanli
▴ 100
2
votes
5
replies
1.0k
views
Gene regulation network analysis mixed with other unrelated events
network analysis
4.6 years ago by
tujuchuanli
▴ 100
7
votes
3
replies
4.6k
views
how to deal with batch effect in TCGA RNA-seq dataset
TCGA
RNA-Seq
batch-effect
updated 18 days ago by
Ram
43k • written 5.1 years ago by
tujuchuanli
▴ 100
1
vote
0
replies
2.1k
views
Question about sva + edgeR to identify differentially expressed genes
sva
edgeR
updated 5.1 years ago by
ATpoint
82k • written 5.1 years ago by
tujuchuanli
▴ 100
1
vote
2
replies
1.3k
views
question about TF enrichment analysis
TF enrichment analysis
updated 5.2 years ago by
liux.bio
▴ 360 • written 5.4 years ago by
tujuchuanli
▴ 100
0
votes
1
reply
778
views
Question about identification of subgroups by a set of genes
TCGA
subgroup
gene signature
updated 5.3 years ago by
finswimmer
16k • written 5.3 years ago by
tujuchuanli
▴ 100
0
votes
2
replies
1.0k
views
question about validation of differentially expressed genes
validation of differentially expressed genes
5.3 years ago by
tujuchuanli
▴ 100
3
votes
13
replies
2.2k
views
question about gene signatures
gene signatures
updated 5.3 years ago by
Kevin Blighe
87k • written 5.3 years ago by
tujuchuanli
▴ 100
2
votes
5
replies
1.8k
views
question about mutation data from TCGA
mutation from TCGA
5.4 years ago by
tujuchuanli
▴ 100
2
votes
2
replies
1.8k
views
question about survival analysis
survival analysis;multiple test correction
5.4 years ago by
tujuchuanli
▴ 100
4
votes
2
replies
2.1k
views
question about survival analysis
survival analysis;DEGs;edgeR
5.5 years ago by
tujuchuanli
▴ 100
0
votes
1
reply
990
views
strange output from DEGseq when searching differential expressed genes
RNA-Seq
DEG
updated 5.5 years ago by
Biostar
20 • written 5.6 years ago by
tujuchuanli
▴ 100
1
vote
4
replies
1.8k
views
question about survival analysis
survival analysis
5.5 years ago by
tujuchuanli
▴ 100
2
votes
4
replies
1.5k
views
strange output from edgeR when searching differential expressed genes
RNA-seq edgeR
updated 5.6 years ago by
Michael
54k • written 5.6 years ago by
tujuchuanli
▴ 100
0
votes
3
replies
1.7k
views
question about coefficient of survival analysis
survival analysis
5.7 years ago by
tujuchuanli
▴ 100
1
vote
3
replies
2.1k
views
question about co-expression in TCGA
co-expression
5.8 years ago by
tujuchuanli
▴ 100
1
vote
6
replies
2.0k
views
Questions about survival analysis
survival analysis
R
5.8 years ago by
tujuchuanli
▴ 100
5
votes
6
replies
1.7k
views
question about identifying differential expressed genes in TCGA
TCGA
updated 5.8 years ago by
Shicheng Guo
★ 9.4k • written 5.8 years ago by
tujuchuanli
▴ 100
3
votes
6
replies
3.8k
views
Correlation between gene expression and methylation
tcga
gene expression
DNA
methylation
updated 5.8 years ago by
pbpanigrahi
▴ 420 • written 5.8 years ago by
tujuchuanli
▴ 100
1
vote
3
replies
2.4k
views
question about survival analysis using TCGA dataset
survival analysis
5.9 years ago by
tujuchuanli
▴ 100
1
vote
2
replies
1.7k
views
How to define a gene is expressed in TCGA dataset
gene expression
TCGA
5.9 years ago by
tujuchuanli
▴ 100
39 results • Page
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