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READ GROUP in GATK
Variant-calling GATK
updated 8 months ago by 43k • written 8 months ago by ▴ 160
2
votes
8
replies
1.0k
views
VCF file CSQ flag
vcf exome-sequencing
updated 11 months ago by 43k • written 11 months ago by ▴ 160
3
votes
4
replies
2.9k
views
Nextseq and Miseq data output difference?
sequencing
updated 15 months ago by ▴ 60 • written 5.2 years ago by ▴ 160
0
votes
3
replies
2.4k
views
Pearson Correlation Single cell seurat
singlecell seurat
updated 19 months ago by 3.9k • written 19 months ago by ▴ 160
5
votes
10
replies
4.1k
views
HIsat2 bam and summary output - multiple output file type
RNA-Seq snakemake sequencing
updated 2.3 years ago by 104k • written 4.8 years ago by ▴ 160
0
votes
1
reply
623
views
ChIPseq annotation with replicates
chipseq
updated 2.3 years ago by 11k • written 2.3 years ago by ▴ 160
0
votes
1
reply
613
views
Deseq2 model matrix error
rnaseq
updated 2.5 years ago by 14k • written 2.5 years ago by ▴ 160
0
votes
2
replies
654
views
P-adjusted value of 1
next-gen sequencing single-cell
3.3 years ago by Payal ▴ 160
1
vote
2
replies
5.4k
views
Seurat FindMarkers avg_logFC for integrated dataset
R RNA-Seq sequencing
updated 2.1 years ago by ▴ 10 • written 3.7 years ago by ▴ 160
5
votes
5
replies
6.3k
views
Seurat DefaultAssay integrated vs RNA
RNA-Seq sequencing R
3.7 years ago by Payal ▴ 160
1
vote
4
replies
2.3k
views
Estimated Number of Cells in 10X vs Cells in Seurat
R Single-cell sequencing
3.8 years ago by Payal ▴ 160
45
votes
9
replies
58k
views
FindConservedMarkers vs FindMarkers vs FindAllMarkers Seurat
next-gen RNA-Seq single-cell R
updated 9 months ago by ▴ 160 • written 4.5 years ago by ▴ 160
2
votes
3
replies
1.2k
views
Is Pseudotime analysis most applicable to time-series experiments?
RNA-Seq single-cell
updated 3.9 years ago by 27k • written 3.9 years ago by ▴ 160
0
votes
0
replies
1.7k
views
Choose root nodes in Monocle3
trajectory Single cell RNA-Seq
4.1 years ago by Payal ▴ 160
2
votes
2
replies
2.5k
views
Unequal sample sizes Deseq2
RNA-Seq sequencing
updated 4.1 years ago by 82k • written 4.1 years ago by ▴ 160
5
votes
4
replies
1.0k
views
Downstream RNA seq analysis
RNA-Seq
updated 4.2 years ago by ★ 6.0k • written 4.2 years ago by ▴ 160
2
votes
6
replies
3.1k
views
Cellranger data to Monocle Pseudotime
single cell rna-seq sequencing
updated 4.3 years ago by ★ 16k • written 4.3 years ago by ▴ 160
9
votes
6
replies
4.8k
views
6 follow
Can we concatenate two fastq files from same sample but different runs
sequencing RNA-Seq
updated 4.9 years ago by ▴ 30 • written 5.9 years ago by ▴ 160
0
votes
0
replies
1.1k
views
qiime 1 biom format error
R software error sequencing
5.4 years ago by Payal ▴ 160
0
votes
4
replies
3.4k
views
Htseq Count Error
RNA-Seq
updated 5.9 years ago by 104k • written 5.9 years ago by ▴ 160
0
votes
5
replies
2.2k
views
3 prime tag counting RNA Seq
RNA-Seq
updated 6.0 years ago by 20 • written 6.1 years ago by ▴ 160
2
votes
2
replies
3.9k
views
How to create EGFP GTF file?
RNA-Seq
updated 6.0 years ago by 142k • written 6.0 years ago by ▴ 160
0
votes
7
replies
3.2k
views
RNA SEQ ERCC
RNA-Seq ERCC tophat bowtie
6.3 years ago by Payal ▴ 160
1
vote
2
replies
3.0k
views
Kraken Database Installation Problem
metagenomics
6.7 years ago by Payal ▴ 160
26
votes
11
replies
15k
views
7 follow
HISAT2 or Tophat2
rna-seq alignment
updated 7.3 years ago by 8.2k • written 7.3 years ago by ▴ 160
25 results • Page 1 of 1
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