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questions
2
votes
2
replies
600
views
replace the NP* accession in header of the fasta file with gene name using GFF file
gene
NP
name
GFF
accession
20 months ago by
najibveto
▴ 110
11
votes
7
replies
1.7k
views
lncRNA analysis tutorial
lncRNA
RNA-seq
20 months ago by
najibveto
▴ 110
2
votes
5
replies
1.6k
views
extract barcode from a fastq file
fastq
barcode
updated 17 months ago by
lkianmehr
▴ 100 • written 2.1 years ago by
najibveto
▴ 110
1
vote
2
replies
1.2k
views
AnnotationForge and Error in FUN(X[[i]], ...) : data.frames in '...' cannot contain duplicated rows
AnnotationForge
2.2 years ago by
najibveto
▴ 110
1
vote
0
replies
572
views
KEGG pathway draw
KEGG
transcriptome
RNAseq
2.7 years ago by
najibveto
▴ 110
3
votes
4
replies
2.0k
views
clusterprofiler for comparing differentially expressed genes
clusterProfiler
comparecluster
2.8 years ago by
najibveto
▴ 110
4
votes
12
replies
1.7k
views
RNAseq analysis for aspergillus niger ?
aspergillus
niger
RNAseq
2.8 years ago by
najibveto
▴ 110
0
votes
3
replies
935
views
RNAseq analysis using EdgeR or Deseq2 for generating fold change graph
change
fold
RNAseq
2.8 years ago by
najibveto
▴ 110
0
votes
1
reply
2.7k
views
error will using transdecoder.predict
transcriptome
transdecoder
updated 3.6 years ago by
Biostar
20 • written 7.4 years ago by
najibveto
▴ 110
3
votes
3
replies
2.7k
views
How to download all the parasite protein data from NCBI?
parasite
protein
ncbi
updated 4.1 years ago by
Biostar
20 • written 7.3 years ago by
najibveto
▴ 110
7
votes
9
replies
1.7k
views
combine nucleotide and amino acid sequence in same figure
gene
protein
updated 4.6 years ago by
ATpoint
82k • written 4.6 years ago by
najibveto
▴ 110
2
votes
10
replies
2.5k
views
remove dubplicate from ensemble seqeunce?
sequences
Ensembl
updated 5.6 years ago by
zx8754
11k • written 7.3 years ago by
najibveto
▴ 110
3
votes
5
replies
2.5k
views
Someone has experience with KNIFE software for circRNA detection?
RNA-Seq
circrna
knife
updated 5.7 years ago by
jianxiangshi
• 0 • written 7.0 years ago by
najibveto
▴ 110
0
votes
4
replies
2.1k
views
bacteriophage genome assembly
bacteriophage
genome
Assembly
de novo
updated 6.1 years ago by
Buffo
★ 2.4k • written 6.1 years ago by
najibveto
▴ 110
2
votes
2
replies
1.5k
views
extraction upstream sequence of precursor microrna
upstream
precu
microrna
precursor
updated 6.6 years ago by
shoujun.gu
▴ 380 • written 6.6 years ago by
najibveto
▴ 110
0
votes
0
replies
1.3k
views
get the 3utr of gene using transcriptome and genome
genome
transciptome
gene
3utr
updated 7.2 years ago by
Biostar
20 • written 7.2 years ago by
najibveto
▴ 110
2
votes
7
replies
2.6k
views
transcriptome shotgun assembly annotation
Assembly
transcriptome
updated 7.4 years ago by
Farbod
★ 3.4k • written 7.4 years ago by
najibveto
▴ 110
6
votes
15
replies
2.0k
views
blast to find gene from an organism based on other organism
zebrafish
blast
fathead minnow
7.5 years ago by
najibveto
▴ 110
0
votes
3
replies
1.9k
views
extract 3'UTR sequeunce from RNAseq data and genome reference
RNA-Seq
genome
8.1 years ago by
najibveto
▴ 110
0
votes
4
replies
1.7k
views
whole genome shotgun assembly
genome
Assembly
8.1 years ago by
najibveto
▴ 110
2
votes
2
replies
3.2k
views
Extract 3'utr from annotation file
genome
updated 8.1 years ago by
Devon Ryan
104k • written 8.1 years ago by
najibveto
▴ 110
5
votes
3
replies
2.7k
views
blast a set of microrna against miRbase microrrna
microrna
updated 8.4 years ago by
Alastair Kerr
5.3k • written 8.4 years ago by
najibveto
▴ 110
2
votes
4
replies
3.2k
views
GOstats for non model organism
R
updated 20 months ago by
Ram
43k • written 8.4 years ago by
najibveto
▴ 110
2
votes
3
replies
4.0k
views
GO enrichmenet analysis of non model organism using bingo
gene ontology
updated 8.4 years ago by
EagleEye
7.5k • written 8.4 years ago by
najibveto
▴ 110
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