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questions
0
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replies
211
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Amplicon analysis from nanopore sequencing
ASV
ONT
amplicon
10 weeks ago by
H.Hasani
▴ 990
1
vote
7
replies
1.1k
views
biomaRt doesn't report uniprot id
R
Uniprot
biomaRt
7 months ago by
H.Hasani
▴ 990
1
vote
3
replies
729
views
take user options before calling snakemake
args
snakemake
sequencing
python
analysis
12 months ago by
H.Hasani
▴ 990
0
votes
0
replies
570
views
Writing into logs in multiple shell commands in snakemake produces error
snakemake
samtools
2.4 years ago by
H.Hasani
▴ 990
0
votes
1
reply
483
views
Analyzing nanoprobes data
Nanoprobes
updated 2.5 years ago by
GenoMax
142k • written 2.5 years ago by
H.Hasani
▴ 990
1
vote
1
reply
812
views
TCGA mutations on Cbioportal
snp
4.4 years ago by
H.Hasani
▴ 990
0
votes
0
replies
698
views
How to get AF in TCGA MutSigNozzleReport2CV Level_4
SNP
tcga
alele fraction
5.5 years ago by
H.Hasani
▴ 990
2
votes
2
replies
3.9k
views
TCGA raw data (Level 1)
RNA-Seq
SNP
copy number
5.9 years ago by
H.Hasani
▴ 990
3
votes
5
replies
10k
views
Bowtie2 error with single end mapping
ChIP-Seq
single-end read
mapping
updated 6.0 years ago by
Lakshman Teja
▴ 50 • written 7.1 years ago by
H.Hasani
▴ 990
2
votes
3
replies
3.0k
views
How to Specify Genome Build in MutSigCV Input ?
gene
Assembly
SNP
genome
updated 21 months ago by
Ram
43k • written 8.4 years ago by
H.Hasani
▴ 990
0
votes
1
reply
1.6k
views
Benchmark papers for Chip genomic enrichment
ChIP-Seq
gene
significant tags
updated 7.2 years ago by
GouthamAtla
12k • written 7.2 years ago by
H.Hasani
▴ 990
8
votes
11
replies
2.7k
views
Visualizing mutations burden vs. gene expression
SNP
gene
R
rna-seq
updated 7.4 years ago by
Biostar
20 • written 7.9 years ago by
H.Hasani
▴ 990
2
votes
9
replies
4.4k
views
csv into genome browser
SNP
genome browser
7.6 years ago by
H.Hasani
▴ 990
1
vote
2
replies
1.4k
views
Protein structure and snps
gene
SNP
7.6 years ago by
H.Hasani
▴ 990
3
votes
3
replies
1.5k
views
Tools for Proteins Interaction
gene
chemical interaction
association degree
updated 7.6 years ago by
Pranavathiyani G
▴ 330 • written 7.6 years ago by
H.Hasani
▴ 990
1
vote
1
reply
1.0k
views
Sequence simulation in cancer context
RNA-Seq
DNA-seq
SNP
sequencing
7.9 years ago by
H.Hasani
▴ 990
9
votes
5
replies
1.5k
views
Genes by Protein Domain
gene
protein
updated 8.0 years ago by
Matthieu Miossec
▴ 370 • written 8.0 years ago by
H.Hasani
▴ 990
3
votes
11
replies
6.1k
views
Obtaining bam files from ICGC or TCGC
RNA-Seq
SNP
genome
updated 8.1 years ago by
Danielk
▴ 640 • written 8.1 years ago by
H.Hasani
▴ 990
0
votes
0
replies
1.0k
views
Cancer mutations in Tumour and Tumour free
snp
rna-seq
updated 21 months ago by
Ram
43k • written 8.4 years ago by
H.Hasani
▴ 990
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