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4
votes
5
replies
2.2k
views
BWA mapping parameters for DNA capture sequencing protocol
alignment bwa dna-seq capture
4.8 years ago by graeme.thorn ▴ 100
0
votes
1
reply
2.2k
views
Comment: C: BWA mapping parameters for DNA capture sequencing protocol
4.8 years ago by graeme.thorn ▴ 100
0
votes
0
replies
883
views
Comment: C: Best practice for serial variant calling
4.8 years ago by graeme.thorn ▴ 100
0
votes
1
reply
883
views
Comment: C: Best practice for serial variant calling
4.8 years ago by graeme.thorn ▴ 100
0
votes
4
replies
883
views
Best practice for serial variant calling
variants
4.8 years ago by graeme.thorn ▴ 100
0
votes
0
replies
1.3k
views
Varscan settings for ctdna variant calling
variants ctdna
4.9 years ago by graeme.thorn ▴ 100
3
votes
2
replies
1.5k
views
Post-filtering WES for mutation calling
mutect2 wxs wes
5.0 years ago by graeme.thorn ▴ 100
0
votes
1
reply
2.2k
views
Comment: C: Formating RNA-seq with UMIs in unmapped BAM files to UMI-tools compatible FASTQ
5.1 years ago by graeme.thorn ▴ 100
0
votes
0
replies
2.2k
views
Comment: C: Formating RNA-seq with UMIs in unmapped BAM files to UMI-tools compatible FASTQ
5.1 years ago by graeme.thorn ▴ 100
3
votes
7
replies
2.2k
views
Formating RNA-seq with UMIs in unmapped BAM files to UMI-tools compatible FASTQ files
RNA-Seq umi pre-processing
5.1 years ago by graeme.thorn ▴ 100
1
vote
0
replies
1.6k
views
Comment: C: How do I download TCGA SNV data for patients with ER+/HER2- breast cancer?
5.1 years ago by graeme.thorn ▴ 100
2
votes
2
replies
1.6k
views
How do I download TCGA SNV data for patients with ER+/HER2- breast cancer?
tcga snp
updated 5.1 years ago by 87k • written 5.1 years ago by ▴ 100
1
vote
3
replies
1.8k
views
Filtering IonTorrent variant caller VCFs
iontorrent variants vcf
5.1 years ago by graeme.thorn ▴ 100
1
vote
0
replies
1.8k
views
Answer: A: Filtering IonTorrent variant caller VCFs
5.1 years ago by graeme.thorn ▴ 100
0
votes
0
replies
1.8k
views
Comment: C: Filtering IonTorrent variant caller VCFs
5.1 years ago by graeme.thorn ▴ 100
0
votes
0
replies
2.1k
views
Answer: A: Variant calling using IonTorrent caller correcting for deamination
5.2 years ago by graeme.thorn ▴ 100
0
votes
4
replies
2.1k
views
Variant calling using IonTorrent caller correcting for deamination
iontorrent variants
5.2 years ago by graeme.thorn ▴ 100
0
votes
1
reply
2.1k
views
Comment: C: Variant calling using IonTorrent caller correcting for deamination
5.2 years ago by graeme.thorn ▴ 100
0
votes
1
reply
854
views
CNV calling on mapped IonTorrent reads
CNV
5.3 years ago by graeme.thorn ▴ 100
1
vote
0
replies
1.3k
views
Answer: A: IonTorrent variant calling: "Missing ZM: tags"
5.6 years ago by graeme.thorn ▴ 100
1
vote
3
replies
1.3k
views
IonTorrent variant calling: "Missing ZM: tags"
ion-torrent variants
5.6 years ago by graeme.thorn ▴ 100
0
votes
0
replies
1.3k
views
Comment: C: IonTorrent variant calling: "Missing ZM: tags"
5.6 years ago by graeme.thorn ▴ 100
0
votes
0
replies
2.5k
views
Comment: C: Downloading triple negative breast cancer data from ICGC
5.7 years ago by graeme.thorn ▴ 100
0
votes
1
reply
2.5k
views
Comment: C: Downloading triple negative breast cancer data from ICGC
5.7 years ago by graeme.thorn ▴ 100
0
votes
4
replies
2.5k
views
Downloading triple negative breast cancer data from ICGC
RNA-Seq icgc
5.7 years ago by graeme.thorn ▴ 100
4
votes
0
replies
1.8k
views
Answer: A: TCGA (legacy) barcodes for identifying tumour/normal samples
5.8 years ago by graeme.thorn ▴ 100
4
votes
1
reply
1.8k
views
TCGA (legacy) barcodes for identifying tumour/normal samples
RNA-Seq
5.8 years ago by graeme.thorn ▴ 100
5
votes
2
replies
2.0k
views
Split bed file by unique first three columns
bedtools bed split
updated 6.6 years ago by 161k • written 6.6 years ago by ▴ 100
0
votes
1
reply
3.3k
views
Comment: C: bedtools intersect "complete outer join"
6.6 years ago by graeme.thorn ▴ 100
3
votes
3
replies
3.3k
views
bedtools intersect "complete outer join"
bedtools
updated 6.6 years ago by 35k • written 6.6 years ago by ▴ 100
10
votes
5
replies
2.5k
views
Extracting nucleotide immediately prior to mapped read
RNA-Seq sequence
updated 21 months ago by 43k • written 8.3 years ago by ▴ 100
2
votes
5
replies
4.4k
views
Error in GSNAP - unable to find genome in directory
gmap gsnap
updated 21 months ago by 43k • written 8.4 years ago by ▴ 100
1
vote
0
replies
4.4k
views
Answer: A: Error in GSNAP - unable to find genome in directory
8.4 years ago by graeme.thorn ▴ 100
0
votes
0
replies
4.4k
views
Comment: C: Error in GSNAP - unable to find genome in directory
8.4 years ago by graeme.thorn ▴ 100
0
votes
0
replies
4.4k
views
Comment: C: Error in GSNAP - unable to find genome in directory
8.4 years ago by graeme.thorn ▴ 100
85 results • Page 2 of 2
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