User: mark.rose

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votes

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332

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igv color

7 months ago by mark.rose ▴ 50

1

vote

1

reply

574

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vcf freebayes bcftools

updated 11 months ago by Ram 43k • written 2.0 years ago by mark.rose ▴ 50

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0

replies

743

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pacbio variant variantCaller vcf consensus

updated 3.5 years ago by Biostar 20 • written 3.6 years ago by mark.rose ▴ 50

1

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1

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687

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gatk alignment dp coverage haplotypecaller

3.6 years ago by mark.rose ▴ 50

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2

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979

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vcf gatk freebayes bbmap igv

3.6 years ago by mark.rose ▴ 50

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2

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1.1k

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igv session xml genome

3.8 years ago by mark.rose ▴ 50

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5

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4.9k

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freebayes haplotype phase phased variant

updated 4.1 years ago by mikemc ▴ 10 • written 8.2 years ago by mark.rose ▴ 50

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3

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871

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bowtie bowtie2 blast score alignment

updated 4.3 years ago by GenoMax 142k • written 4.3 years ago by mark.rose ▴ 50

2

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13

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5.1k

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alignment

updated 2.4 years ago by Ram 43k • written 9.8 years ago by mark.rose ▴ 50

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1

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1.8k

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bbmap secondary

updated 5.5 years ago by Biostar 20 • written 5.5 years ago by mark.rose ▴ 50

1

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6

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2.2k

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BBMAP bbmap align paired-end

updated 5.6 years ago by h.mon 35k • written 5.6 years ago by mark.rose ▴ 50

2

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12

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4.3k

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picard extractilluminabarcodes demultiplex

5.9 years ago by mark.rose ▴ 50

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12

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1.6k

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igv SNP

updated 6.1 years ago by finswimmer 16k • written 6.1 years ago by mark.rose ▴ 50

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8

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3.8k

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bbmap align paired-end

6.2 years ago by mark.rose ▴ 50

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2

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1.5k

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jellyfish configure kraken

6.3 years ago by mark.rose ▴ 50

1

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7

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2.0k

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igv track

updated 6.5 years ago by Jim Robinson ▴ 300 • written 6.5 years ago by mark.rose ▴ 50

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5

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2.8k

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variants phase freebayes platypus problem

updated 7.1 years ago by arezansoff ▴ 20 • written 8.1 years ago by mark.rose ▴ 50

3

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2

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2.9k

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aligner bowtie bwa blasr indel

updated 7.3 years ago by Brian Bushnell 20k • written 7.3 years ago by mark.rose ▴ 50

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14

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3.3k

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variant insertion deletion mpileup freebayes

7.5 years ago by mark.rose ▴ 50

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2

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1.4k

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annotation assembly

updated 11 months ago by Ram 43k • written 7.5 years ago by mark.rose ▴ 50

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1

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1.5k

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bg7 annotation assembly bacterial

7.5 years ago by mark.rose ▴ 50

1

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5

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3.5k

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picard error duplicates

updated 7.5 years ago by Dan D 7.4k • written 7.5 years ago by mark.rose ▴ 50

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2

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2.4k

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bowtie bowtie2 concordant

updated 7.5 years ago by Devon Ryan 104k • written 7.5 years ago by mark.rose ▴ 50

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0

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1.9k

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bam-readcount error warning alignment bam

7.5 years ago by mark.rose ▴ 50

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3

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2.4k

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bam-readcount bam variant alignment

updated 7.8 years ago by ernfrid ▴ 220 • written 7.8 years ago by mark.rose ▴ 50

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0

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2.1k

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varscan pacbio blasr mpileup

8.0 years ago by mark.rose ▴ 50

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2

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2.3k

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bam-readcount bam

updated 8.0 years ago by ernfrid ▴ 220 • written 8.0 years ago by mark.rose ▴ 50

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5

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3.5k

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software-error next-gen

updated 2.1 years ago by Ram 43k • written 9.3 years ago by mark.rose ▴ 50