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mohsamir2016
mohsamir2016
Reputation:
30 (New)
Joined:
4.9 years ago
Last seen:
3.2 years ago
Location:
Egypt

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Latest posts by user
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Comment: Comment: Error massage when running a GATK tool (selectvariants): no positional argument
written by mohsamir2016 3
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1 reply
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Comment: Comment: Error massage when running a GATK tool (selectvariants): no positional argument
written by mohsamir2016 3
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5 replies
2.5K views
Error message when running a GATK SelectVariants: no positional argument is defined for this tool
gatk snps
updated by Ram 4.5K • | written by mohsamir2016 3
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1 reply
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Comment: Comment: Getting sequences from fastq file using Grep command
written by mohsamir2016 3
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0 replies
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Comment: Comment: Getting sequences from fastq file using Grep command
written by mohsamir2016 3
0 votes
1 reply
0 views
Comment: Comment: Getting sequences from fastq file using Grep command
written by mohsamir2016 3
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11 replies
6.2K views
Getting sequences from fastq file using Grep command
linux
updated by swbarnes2 1.5K • | written by mohsamir2016 3
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0 replies
636 views
Correction for among sample/chromosomes for sequenicng depth, when comparing between samples or animals
gatk snps
written by mohsamir2016 3
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1 reply
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Comment: Comment: How GATK pipeline called a homozygeous alternate allele (1/1) although one copy
updated by Ram 4.5K • | written by mohsamir2016 3
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1 reply
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Comment: Comment: How GATK pipeline called a homozygeous alternate allele (1/1) although one copy
written by mohsamir2016 3
0 votes
7 replies
1.9K views
How GATK pipeline called a homozygeous alternate allele (1/1) although one copy is supported by 0 reads ?
snp gatk
updated by Ram 4.5K • | written by mohsamir2016 3
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1 reply
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Comment: Comment: Extracting information from VCF file for many specific positions in specific chr
written by mohsamir2016 3
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3 replies
1.5K views
Extracting information from VCF file for many specific positions in specific chromosomes
snp rna gatk seq
updated by Pierre Lindenbaum 17K • | written by mohsamir2016 3
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1 reply
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Comment: Comment: Concatenating fastq for the same sample or doing it separately and merge at the
written by mohsamir2016 3
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8 replies
3.8K views
Concatenating fastq for the same sample or doing it separately and merge at the BAM stage ?
rna-seq
updated by Ram 4.5K • | written by mohsamir2016 3
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1 reply
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Comment: Comment: bcftools isec output for multiple vcf files interpretations
written by mohsamir2016 3
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0 replies
682 views
Visualizing a mapped SNPs/INDELs on chromosomes of chicken
genomic
written by mohsamir2016 3
0 votes
1 reply
6.9K views
Failed to install a package from Bioconductor and the library location not writable
bioconductor rna-seq r
updated by Ram 4.5K • | written by mohsamir2016 3
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1 reply
0 views
Answer: Answer: Does a merged VCF file (using bcftools merge) contain unique SNPs or INDELs fro
written by mohsamir2016 3
0 votes
3 replies
2.5K views
Does a merged VCF file (using bcftools merge) contain unique SNPs or INDELs from all merged VCF files
vcf
updated by barslmn 245 • | written by mohsamir2016 3
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