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Comment: Comment: bcftools select sites with multiple combinations of FILTER column
7 weeks ago by User000 ▴ 690
0
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1
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444
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Comment: Comment: bcftools select sites with multiple combinatio ns of FILTER column
7 weeks ago by User000 ▴ 690
1
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4
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444
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bcftools select sites with multiple combinations of FILTER column
bcftools
7 weeks ago by User000 ▴ 690
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0
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900
views
Comment: Comment: VEP/ CADD error - ERROR: Assembly is GRCh38 but CADD file does not contain GRCh3
12 months ago by User000 ▴ 690
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0
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435
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Analyse UMI using picard's ExtractIlluminaBarcodes & IlluminaBasecallsToSam with 2 or 4 lanes
picard umi
12 months ago by User000 ▴ 690
0
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1
reply
722
views
How to remove from BAM file header all chromosomes, except chrM
samtools
updated 10 months ago by 43k • written 15 months ago by ▴ 690
1
vote
1
reply
532
views
DepthOfCoverage badly formed genome location error
coverage
updated 14 months ago by ★ 3.0k • written 15 months ago by ▴ 690
1
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6
replies
2.7k
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Bedtools coverage histogram
bedtools
updated 18 months ago by • 0 • written 3.0 years ago by ▴ 690
1
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0
replies
2.7k
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Comment: Comment: Bedtools coverage histogram
18 months ago by User000 ▴ 690
0
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0
replies
625
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Getting the mean normalized expression values of mutants and controls in DESeq2 prior calculation of Log2FC
DESeq2 RNAseq Log2FC
19 months ago by User000 ▴ 690
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0
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54k
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Comment: Comment: How to extract specific chromosome from vcf file
23 months ago by User000 ▴ 690
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1
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5.9k
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Comment: Comment: A script for extracting information related to a list of gene names from a file
23 months ago by User000 ▴ 690
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1
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5.9k
views
Comment: Comment: A script for extracting information related to a list of gene names from a file
23 months ago by User000 ▴ 690
0
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0
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1.1k
views
Comment: Comment: g.vcf file with different FORMAT (GT:AD:DP:GQ:PL:SB vs GT:DP:GQ:MIN_DP:PL)
2.0 years ago by User000 ▴ 690
0
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2
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1.1k
views
g.vcf file with different FORMAT (GT:AD:DP:GQ:PL:SB vs GT:DP:GQ:MIN_DP:PL)
vcf
2.0 years ago by User000 ▴ 690
1
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0
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501
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How to get sample names and genotype for SNP in multi-sample VCF file with special occurence
vcf
2.1 years ago by User000 ▴ 690
7
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8
replies
3.2k
views
bcftools query add header
bcftools
updated 16 months ago by ▴ 150 • written 2.1 years ago by ▴ 690
1
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1
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3.2k
views
Answer: Answer: bcftools query add header
2.1 years ago by User000 ▴ 690
0
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0
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3.2k
views
Comment: Comment: bcftools query add header
2.1 years ago by User000 ▴ 690
0
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1
reply
3.2k
views
Comment: Comment: bcftools query add header
2.1 years ago by User000 ▴ 690
0
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1
reply
3.2k
views
Comment: Comment: bcftools query add header
2.1 years ago by User000 ▴ 690
0
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0
replies
1.0k
views
Comment: Comment: Merge two files with multiple columns by 4 common columns
2.1 years ago by User000 ▴ 690
3
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8
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1.0k
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Merge two files with multiple columns by 4 common columns
vcf
updated 2.1 years ago by 21k • written 2.1 years ago by ▴ 690
0
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3
replies
1.0k
views
Comment: Comment: Merge two files with multiple columns by 4 common columns
2.1 years ago by User000 ▴ 690
0
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0
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15k
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Comment: Comment: How to get sample names and genotype for SNP in multi-sample VCF file
2.1 years ago by User000 ▴ 690
1
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1
reply
1.6k
views
Comment: Comment: Failed to instantiate plugin dbNSFP in VEP
2.2 years ago by User000 ▴ 690
0
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1
reply
1.7k
views
Comment: Comment: Exract only first individual from vcf file
2.3 years ago by User000 ▴ 690
0
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1
reply
1.7k
views
Comment: Comment: Exract only first individual from vcf file
2.3 years ago by User000 ▴ 690
5
votes
9
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1.7k
views
Extract only first individual from vcf files
vcf
updated 2.3 years ago by 21k • written 2.3 years ago by ▴ 690
5
votes
5
replies
1.3k
views
Enrichment plot in R with custom pathways
RNAseq DESeq2 enrichplot R
updated 2.3 years ago by 27k • written 2.3 years ago by ▴ 690
0
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1
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1.3k
views
Comment: Comment: Enrichment plot in R with custom pathways
2.3 years ago by User000 ▴ 690
0
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1
reply
1.9k
views
Comment: Comment: Snakemake error with 'wildcard'
2.3 years ago by User000 ▴ 690
0
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1
reply
1.9k
views
Answer: Answer: Snakemake error with 'wildcard'
2.3 years ago by User000 ▴ 690
0
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1
reply
1.9k
views
Comment: Comment: Snakemake error with 'wildcard'
2.3 years ago by User000 ▴ 690
8
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7
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6.4k
views
Split multiallelic SNPs to biallelic from vcf
python R bash vcf
updated 2.3 years ago by ★ 4.3k • written 3.2 years ago by ▴ 690
0
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1
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1.6k
views
Comment: Comment: DESeq2 contrast multiple treated conditions versus multiple control conditions
2.3 years ago by User000 ▴ 690
0
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0
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1.6k
views
Comment: Comment: DESeq2 contrast multiple treated conditions versus multiple control conditions
2.3 years ago by User000 ▴ 690
2
votes
4
replies
1.6k
views
DESeq2 contrast multiple treated conditions versus multiple control conditions
RNAseq DESeq2
2.3 years ago by User000 ▴ 690
0
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0
replies
2.7k
views
Comment: Comment: How to pass multiple "argument value" pair using variable in GATK command?
2.4 years ago by User000 ▴ 690
1
vote
0
replies
766
views
Enrichplot heatplot label_format does not work
enrichplot DESeq2 heatplot RNAseq
2.6 years ago by User000 ▴ 690
0
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0
replies
3.3k
views
Comment: Comment: DESeq2 log2FC and p-value filtering
2.6 years ago by User000 ▴ 690
0
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0
replies
3.3k
views
Comment: Comment: DESeq2 log2FC and p-value filtering
2.6 years ago by User000 ▴ 690
0
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1
reply
3.3k
views
Comment: Comment: DESeq2 log2FC and p-value filtering
2.6 years ago by User000 ▴ 690
0
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1
reply
3.3k
views
Comment: Comment: DESeq2 log2FC and p-value filtering
2.6 years ago by User000 ▴ 690
7
votes
7
replies
3.3k
views
DESeq2 log2FC and p-value filtering
DESeq2 RNAseq
updated 2.6 years ago by 19k • written 2.6 years ago by ▴ 690
0
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0
replies
691
views
DESeq2 treated vs untreated and contrast vs no contrast
DESeq2 RNAseq
2.7 years ago by User000 ▴ 690
16
votes
15
replies
11k
views
8 follow
BAM files compression
bam
updated 2.8 years ago by ▴ 230 • written 4.3 years ago by ▴ 690
2
votes
2
replies
1.3k
views
DESeq2 results difference using contrast and single conditions
DESeq2 RNAseq
2.8 years ago by User000 ▴ 690
5
votes
4
replies
1.1k
views
Convert missing genotype ./. to homozygous 0/0 in vcf
vcf
updated 2.8 years ago by ▴ 480 • written 2.8 years ago by ▴ 690
0
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0
replies
1.1k
views
Comment: Comment: Convert missing genotype ./. to homozygous 0/0 in vcf
2.8 years ago by User000 ▴ 690
393 results • Page 1 of 8
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