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questions
0
votes
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replies
1.3k
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Cuffcompare: Sensitivity (Sn) higher than 100
Cuffcompare
RNA-Seq
8.1 years ago by
drtamermansour
▴ 40
0
votes
0
replies
2.2k
views
Identify read group info for multiplexed samples
variant-calling
read-group
updated 21 months ago by
Ram
43k • written 8.4 years ago by
drtamermansour
▴ 40
1
vote
0
replies
2.5k
views
Extracting transcripts in gtf from reference with incorporation of variants from vcf
RNA-Seq
VCF
getfasta
updated 21 months ago by
Ram
43k • written 8.6 years ago by
drtamermansour
▴ 40
0
votes
3
replies
3.3k
views
Low final mapping rate by TopHat in spite of high initial Bowtie mapping
alignment
TopHat
RNA-Seq
updated 19 months ago by
Ram
43k • written 8.8 years ago by
drtamermansour
▴ 40
10
votes
5
replies
4.2k
views
How To Identify The Origin Of Tumor By Rnaseq
cancer
rnaseq
updated 9.4 years ago by
Biostar
20 • written 10.4 years ago by
drtamermansour
▴ 40
0
votes
0
replies
2.0k
views
Reconstruction of complete gene cDNA from Trinity output
Transcriptome
ESTassembly
EGassembler
updated 3.1 years ago by
Ram
43k • written 9.6 years ago by
drtamermansour
▴ 40
4
votes
3
replies
6.4k
views
VelvetOptimiser: optimum cov_cutoff, PE insert stats, 2 Insert Size Libraries, N's without scaffolding, Using 2 Insert Size Libraries
denovoassembly
VelvetOptimiser
updated 3.1 years ago by
Ram
43k • written 9.6 years ago by
drtamermansour
▴ 40
1
vote
2
replies
3.1k
views
Extend a contig using NGS library
Assembly
updated 10.0 years ago by
Rayan Chikhi
★ 1.5k • written 10.0 years ago by
drtamermansour
▴ 40
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