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Producing sequence for splicing isoforms
isoform rMATs splicing alternative SplAdder
7 days ago by tomas4482 ▴ 400
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793
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Comment: Comment: could not find function "gseGO" in ClusterProfiler
10 months ago by tomas4482 ▴ 400
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1
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781
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Answer: Answer: Somatic variant calling mutect2 ctDNA liquid biopsy
12 months ago by tomas4482 ▴ 400
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475
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Answer: Answer: How can I make a similar mutated gene expression figure with TCGA data
13 months ago by tomas4482 ▴ 400
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1.1k
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Comment: Comment: Seurat Metadata to Dataframe Manipulation
15 months ago by tomas4482 ▴ 400
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1.1k
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Answer: Answer: Seurat Metadata to Dataframe Manipulation
15 months ago by tomas4482 ▴ 400
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1.4k
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Comment: Comment: Is it possible to split BAM without sorting it?
19 months ago by tomas4482 ▴ 400
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521
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Answer: Answer: Batch effect removal for RNA-seq data (single-end and pair-end)
19 months ago by tomas4482 ▴ 400
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1.4k
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Comment: Comment: Is it possible to split BAM without sorting it?
19 months ago by tomas4482 ▴ 400
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1.4k
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Comment: Comment: Is it possible to split BAM without sorting it?
19 months ago by tomas4482 ▴ 400
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10
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1.4k
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Is it possible to split BAM without sorting it?
samtools BAM bamtools
19 months ago by tomas4482 ▴ 400
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1.4k
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Comment: Comment: Is it possible to split BAM without sorting it?
19 months ago by tomas4482 ▴ 400
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1.4k
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Comment: Comment: Is it possible to split BAM without sorting it?
19 months ago by tomas4482 ▴ 400
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468
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Answer: Answer: RNA-seq data from human patients with both GBM and Alzheimer's
20 months ago by tomas4482 ▴ 400
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1.2k
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Comment: Comment: Variant identified, What next?
20 months ago by tomas4482 ▴ 400
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967
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Comment: Comment: BLAST unmapped reads from BAM
21 months ago by tomas4482 ▴ 400
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1.2k
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Answer: Answer: Variant identified, What next?
21 months ago by tomas4482 ▴ 400
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1.1k
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Comment: Comment: Merging different fastq files into one folder
21 months ago by tomas4482 ▴ 400
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1.1k
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Answer: Answer: Merging different fastq files into one folder
21 months ago by tomas4482 ▴ 400
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2.8k
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Comment: Comment: How to convert a FASTQ file to FASTA file without the number of reads
21 months ago by tomas4482 ▴ 400
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2.8k
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Comment: Comment: How to convert a FASTQ file to FASTA file without the number of reads
21 months ago by tomas4482 ▴ 400
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1
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2.8k
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Answer: Answer: How to convert a FASTQ file to FASTA file without the number of reads
21 months ago by tomas4482 ▴ 400
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990
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Comment: Comment: Count expression of 10x scRNA-seq after UMI extraction
21 months ago by tomas4482 ▴ 400
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5
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990
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Count expression of 10x scRNA-seq after UMI extraction
featureCount subread scRNA umitools
21 months ago by tomas4482 ▴ 400
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1
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990
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Comment: Comment: Count expression of 10x scRNA-seq after UMI extraction
21 months ago by tomas4482 ▴ 400
4
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1
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2.6k
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Answer: Answer: Installing ensembl-vep
21 months ago by tomas4482 ▴ 400
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485
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Answer: Answer: How to match tumor fastq file to normal fastq file? (I just have a set of tumor
21 months ago by tomas4482 ▴ 400
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Comment: Comment: SRA not splitting when trying to download fastq
21 months ago by tomas4482 ▴ 400
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2.3k
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Comment: Comment: SRA not splitting when trying to download fastq
21 months ago by tomas4482 ▴ 400
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1.1k
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Comment: Comment: merging data; remove extra rows
21 months ago by tomas4482 ▴ 400
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1.1k
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Answer: Answer: merging data; remove extra rows
21 months ago by tomas4482 ▴ 400
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525
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Answer: Answer: Retrieval of specific classes from an Ontology
21 months ago by tomas4482 ▴ 400
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2.3k
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Comment: Comment: SRA not splitting when trying to download fastq
21 months ago by tomas4482 ▴ 400
1
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1
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2.3k
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Comment: Comment: SRA not splitting when trying to download fastq
21 months ago by tomas4482 ▴ 400
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2.3k
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Answer: Answer: SRA not splitting when trying to download fastq
21 months ago by tomas4482 ▴ 400
0
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0
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955
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Comment: Comment: correlation among RNAseq and proteomics analysis
21 months ago by tomas4482 ▴ 400
2
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1
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955
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Answer: Answer: correlation among RNAseq and proteomics analysis
21 months ago by tomas4482 ▴ 400
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1
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3.5k
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Comment: Comment: Distinguish between forward strand, plus strand, sense strand
22 months ago by tomas4482 ▴ 400
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1
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2.5k
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Comment: Comment: Some cells in meta.data not present in provided counts matrix.
22 months ago by tomas4482 ▴ 400
1
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1
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3.5k
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Comment: Comment: Distinguish between forward strand, plus strand, sense strand
22 months ago by tomas4482 ▴ 400
1
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1
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3.5k
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Answer: Answer: Distinguish between forward strand, plus strand, sense strand
22 months ago by tomas4482 ▴ 400
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1
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1.3k
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Comment: Comment: using txt file to pass pathways for pipelines
22 months ago by tomas4482 ▴ 400
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1.3k
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Comment: Comment: using txt file to pass pathways for pipelines
22 months ago by tomas4482 ▴ 400
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1.3k
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Comment: Comment: using txt file to pass pathways for pipelines
22 months ago by tomas4482 ▴ 400
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1
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6.5k
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Comment: Comment: 10x 3' library creates R1 and R2 fastq files with the same read length
22 months ago by tomas4482 ▴ 400
0
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1
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6.5k
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Comment: Comment: 10x 3' library creates R1 and R2 fastq files with the same read length
22 months ago by tomas4482 ▴ 400
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1
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6.5k
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Comment: Comment: 10x 3' library creates R1 and R2 fastq files with the same read length
22 months ago by tomas4482 ▴ 400
9
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18
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6.5k
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6 follow
10x 3' library creates R1 and R2 fastq files with the same read length
10x fastq scRNA-seq
updated 9 months ago by • 0 • written 22 months ago by ▴ 400
2
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1.1k
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Answer: Answer: The nightmare of coordinate systems
22 months ago by tomas4482 ▴ 400
1
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0
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821
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Comment: Comment: Make a specific format gene ontology file?
22 months ago by tomas4482 ▴ 400
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