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coleman_jonathan
coleman_jonathan
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470
Joined:
13.0 years ago
Last seen:
3.0 years ago
Location:
European Union

about me

Latest posts by user
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Comment: Comment: Recalculate R2 in imputed genotype data
written by coleman_jonathan coleman_jonathan
1 vote
0 replies
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Answer: Answer: Why exactly do I need to fix ref allele using bcftools ?? [Genotype data]
written by coleman_jonathan coleman_jonathan
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1 reply
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Comment: Comment: Simple tandem repeat (STR) reference for hg38
written by coleman_jonathan coleman_jonathan
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2 replies
1.2K views
Recalculate R2 in imputed genotype data
vcf information imputation
written by coleman_jonathan coleman_jonathan
0 votes
0 replies
1.3K views
Excess average identical-by-descent in genotyping data
genotyping snp gwas quality control
written by coleman_jonathan coleman_jonathan
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0 replies
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Comment: C: Calculate average parental genotype
written by coleman_jonathan coleman_jonathan
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0 replies
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Comment: C: Calculate average parental genotype
written by coleman_jonathan coleman_jonathan
1 vote
7 replies
2.3K views
Calculate average parental genotype
gwas snp
updated by finswimmer finswimmer • written by coleman_jonathan coleman_jonathan
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Comment: C: What Are Good Values For R^2 And D' For Linkage Disequilibrium
written by coleman_jonathan coleman_jonathan
1 vote
0 replies
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Comment: C: Ways to convert .impute2 to .mldose
written by coleman_jonathan coleman_jonathan
2 votes
0 replies
1 view
Answer: A: Using family data in Mixed Linear Model Association Analyses (MLMA)
written by coleman_jonathan coleman_jonathan
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0 replies
1 view
Answer: A: GWAS with few samples
written by coleman_jonathan coleman_jonathan
1 vote
1 reply
1 view
Answer: A: awk to clip off telomeres
updated by GouthamAtla GouthamAtla • written by coleman_jonathan coleman_jonathan
2 votes
1 reply
2.6K views
Using family data in Mixed Linear Model Association Analyses (MLMA)
genome gcta mlma family
written by coleman_jonathan coleman_jonathan
3 votes
1 reply
1 view
Answer: A: PRSice polygenic score with only controls
written by coleman_jonathan coleman_jonathan
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Comment: C: Ways to convert .impute2 to .mldose
written by coleman_jonathan coleman_jonathan
0 votes
1 reply
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Comment: C: Phenotype choice for one of a MZ twin pair in a genetic association study
updated by Ram Ram • written by coleman_jonathan coleman_jonathan
0 votes
1 reply
2.2K views
Power analysis for covariate-adjusted two sample t-test
power t-test statistics
updated by Ram Ram • written by coleman_jonathan coleman_jonathan
7 votes
1 reply
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Answer: Answer: Calculate z-scores from GWAS summary stats
updated by Ram Ram • written by coleman_jonathan coleman_jonathan
2 votes
1 reply
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Answer: Answer: SNPRelate: how to give specific color to a population in PCA plot
updated by Ram Ram • written by coleman_jonathan coleman_jonathan
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