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3
votes
1
reply
15k
views
Comment:
C: How to calculate Tumor Mutation Burden (TMB) for TCGA samples
5.2 years ago by
bruce.moran
▴ 960
3
votes
1
reply
15k
views
Answer:
C: How to calculate Tumor Mutation Burden (TMB) for TCGA samples
5.2 years ago by
bruce.moran
▴ 960
1
vote
1
reply
2.6k
views
Comment:
C: Microsatellite Instability, Whole exome sequencing
5.2 years ago by
bruce.moran
▴ 960
2
votes
2
replies
2.6k
views
Answer:
A: Microsatellite Instability, Whole exome sequencing
5.2 years ago by
bruce.moran
▴ 960
0
votes
0
replies
5.0k
views
Comment:
C: low unique mapping ratio of RNA-seq data
5.2 years ago by
bruce.moran
▴ 960
0
votes
1
reply
5.0k
views
Comment:
C: low unique mapping ratio of RNA-seq data
5.2 years ago by
bruce.moran
▴ 960
1
vote
1
reply
5.0k
views
Answer:
A: low unique mapping ratio of RNA-seq data
5.2 years ago by
bruce.moran
▴ 960
0
votes
1
reply
5.0k
views
Comment:
C: low unique mapping ratio of RNA-seq data
5.2 years ago by
bruce.moran
▴ 960
1
vote
2
replies
1.3k
views
Comment:
C: Unequally pooling libraries for RNAseq?
5.3 years ago by
bruce.moran
▴ 960
5
votes
1
reply
7.1k
views
Answer:
A: Remove duplicates in an extremely large text file
5.3 years ago by
bruce.moran
▴ 960
2
votes
0
replies
1.4k
views
Answer:
A: Where can I find public Single Cell RNA-seq Gene Expression data from Ovarian ca
5.3 years ago by
bruce.moran
▴ 960
0
votes
0
replies
3.0k
views
Comment:
C: So frustrated compiling necessary packages in a linux system
5.6 years ago by
bruce.moran
▴ 960
1
vote
0
replies
3.0k
views
Comment:
C: So frustrated compiling necessary packages in a linux system
5.6 years ago by
bruce.moran
▴ 960
0
votes
1
reply
3.0k
views
Comment:
C: So frustrated compiling necessary packages in a linux system
5.6 years ago by
bruce.moran
▴ 960
0
votes
0
replies
1.7k
views
Comment:
C: MarkDuplicates RG ID on SAMRecord not found in header
5.6 years ago by
bruce.moran
▴ 960
1
vote
2
replies
1.7k
views
MarkDuplicates RG ID on SAMRecord not found in header
RNA-Seq
exome
software error
5.6 years ago by
bruce.moran
▴ 960
0
votes
0
replies
4.1k
views
Comment:
C: Can genomicranges do bedtools-like intersection operations?
5.9 years ago by
bruce.moran
▴ 960
0
votes
1
reply
4.1k
views
Comment:
A: Can genomicranges do bedtools-like intersection operations?
5.9 years ago by
bruce.moran
▴ 960
0
votes
2
replies
4.1k
views
Comment:
C: Can genomicranges do bedtools-like intersection operations?
5.9 years ago by
bruce.moran
▴ 960
0
votes
0
replies
3.3k
views
Answer:
A: Sleuth PCA plots - how to change axis to percentage?
5.9 years ago by
bruce.moran
▴ 960
0
votes
0
replies
15k
views
Answer:
A: duplicate 'row.names' are not allowed
5.9 years ago by
bruce.moran
▴ 960
1
vote
0
replies
5.2k
views
Comment:
C: EPIC array annotation
5.9 years ago by
bruce.moran
▴ 960
2
votes
1
reply
5.2k
views
Comment:
C: EPIC array annotation
6.0 years ago by
bruce.moran
▴ 960
6
votes
4
replies
5.2k
views
EPIC array annotation
methylation
array
epic
updated 6.0 years ago by
andrew.j.skelton73
6.6k • written 6.0 years ago by
bruce.moran
▴ 960
1
vote
0
replies
3.7k
views
Answer:
A: CNA vs mRNA Expression level
6.5 years ago by
bruce.moran
▴ 960
1
vote
0
replies
7.2k
views
Comment:
C: Isolating reads from specific region from bam file
6.5 years ago by
bruce.moran
▴ 960
0
votes
0
replies
6.6k
views
Comment:
C: What's fascinating about Bioinformatics for potential students?
6.6 years ago by
bruce.moran
▴ 960
1
vote
1
reply
939
views
Comment:
C: Alignment of exome to gene set
6.6 years ago by
bruce.moran
▴ 960
1
vote
0
replies
6.9k
views
Comment:
C: How to rename chromosome names in GTF file?
6.7 years ago by
bruce.moran
▴ 960
5
votes
1
reply
13k
views
Answer:
A: Dealing with multimapping reads in featureCounts
6.7 years ago by
bruce.moran
▴ 960
1
vote
0
replies
2.6k
views
Comment:
C: CWL rerunning completed output
6.7 years ago by
bruce.moran
▴ 960
0
votes
1
reply
2.6k
views
Comment:
C: CWL rerunning completed output
6.7 years ago by
bruce.moran
▴ 960
0
votes
1
reply
2.6k
views
Comment:
C: CWL rerunning completed output
6.7 years ago by
bruce.moran
▴ 960
8
votes
7
replies
2.6k
views
CWL rerunning completed output
Common-Workflow-Language
CWL
updated 8 months ago by
Ram
44k • written 6.7 years ago by
bruce.moran
▴ 960
0
votes
0
replies
2.8k
views
Comment:
C: CWL: print out command lines?
6.7 years ago by
bruce.moran
▴ 960
0
votes
1
reply
1.7k
views
Comment:
C: Ensembl VEP 89 Output Format
6.8 years ago by
bruce.moran
▴ 960
4
votes
3
replies
1.7k
views
Ensembl VEP 89 Output Format
VEP
Ensembl
updated 6.8 years ago by
Emily
23k • written 6.8 years ago by
bruce.moran
▴ 960
1
vote
0
replies
3.0k
views
Comment:
C: Pipe BBMap reformat output into SAMtools
6.8 years ago by
bruce.moran
▴ 960
0
votes
1
reply
3.0k
views
Comment:
C: Pipe BBMap reformat output into SAMtools
6.8 years ago by
bruce.moran
▴ 960
0
votes
1
reply
3.0k
views
Comment:
C: Pipe BBMap reformat output into SAMtools
6.8 years ago by
bruce.moran
▴ 960
3
votes
1
reply
3.0k
views
Answer:
A: Pipe BBMap reformat output into SAMtools
6.8 years ago by
bruce.moran
▴ 960
6
votes
9
replies
3.0k
views
Pipe BBMap reformat output into SAMtools
bbmap
samtools
pipe
6.8 years ago by
bruce.moran
▴ 960
0
votes
0
replies
3.0k
views
Comment:
C: Pipe BBMap reformat output into SAMtools
6.8 years ago by
bruce.moran
▴ 960
1
vote
0
replies
3.1k
views
Answer:
A: In FACETS, what does the mafR value represent?
6.8 years ago by
bruce.moran
▴ 960
0
votes
0
replies
2.9k
views
Comment:
C: Are there NGS-based CNV callers that utilise allele frequency?
6.8 years ago by
bruce.moran
▴ 960
0
votes
1
reply
3.2k
views
Comment:
C: BWA option about the insert size
6.9 years ago by
bruce.moran
▴ 960
0
votes
0
replies
2.5k
views
Comment:
C: Subtracting contamination from RNASeq data
6.9 years ago by
bruce.moran
▴ 960
0
votes
2
replies
2.5k
views
Comment:
C: Subtracting contamination from RNASeq data
6.9 years ago by
bruce.moran
▴ 960
2
votes
1
reply
3.8k
views
Comment:
C: Are these false somatic variants? Visual inspection with IGV
7.0 years ago by
bruce.moran
▴ 960
0
votes
1
reply
6.8k
views
Comment:
C: Getting intersect between three tables of genes in Rstudio
7.0 years ago by
bruce.moran
▴ 960
158 results • Page
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