This is a test version of Biostars. For the public version, visit https://www.biostars.org.
lwc628
lwc628
Reputation:
230
Joined:
13.8 years ago
Last seen:
11.1 years ago
Location:
United States

about me

Latest posts by user
0 votes
0 replies
0 views
Comment: Comment: What program do I use to generate a single contig given a set of short contigs a
updated by Ram Ram • written by lwc628 lwc628
0 votes
4 replies
5.3K views
What program do I use to generate a single contig given a set of short contigs and the template?
assembly sequence alignment
updated by Ram Ram • written by lwc628 lwc628
2 votes
0 replies
0 views
Answer: Answer: Does trinity discard reads shorter than 25-mer?
updated by Ram Ram • written by lwc628 lwc628
0 votes
2 replies
2.8K views
Does trinity discard reads shorter than 25-mer?
trinity denovo-assembly rna-seq
updated by Ram Ram • written by lwc628 lwc628
0 votes
1 reply
2.8K views
Can I download ENSEMBL gtf whose release number is different from that of the corresponding genome as long as the assembly is identical?
genome annotation ensembl
updated by Ram Ram • written by lwc628 lwc628
0 votes
1 reply
0 views
Comment: Comment: Without genome reference, how to find exon-exon junctions given isoforms
updated by Ram Ram • written by lwc628 lwc628
0 votes
1 reply
0 views
Comment: Comment: Without genome reference, how to find exon-exon junctions given isoforms
updated by Ram Ram • written by lwc628 lwc628
0 votes
7 replies
3.9K views
Without genome reference, how to find exon-exon junctions given isoforms
rna-seq
updated by Ram Ram • written by lwc628 lwc628
0 votes
1 reply
2.3K views
Explanation for strange kmer enrichment at the end of the RNA-seq reads
rna-seq
updated by Ram Ram • written by lwc628 lwc628
1 vote
2 replies
2.8K views
How to account for between-subjects variability in this particular RNA-seq study?
rna-seq
updated by Ram Ram • written by lwc628 lwc628
2 votes
1 reply
4.2K views
How Is -U Flag(Compressed) Different From -B Flag In Samtools?
samtools
updated by lomereiter lomereiter • written by lwc628 lwc628
1 vote
2 replies
3.1K views
What Is The Difference Between U133A And U95 Chip?
microarray affymetrix
updated by Ashley Stephen Doane • Ashley Stephen Doane • written by lwc628 lwc628
2 votes
2 replies
3.5K views
Interesting Math Problem: How Do You "Un"-Sizefactor The Normalized Counts In Deseq?
deseq rna-seq expression
updated by matted matted • written by lwc628 lwc628
5 votes
1 reply
5.3K views
Combining P Values And Adjust For Multiple Hypotheses Or The Other Way Around?
updated by brentp brentp • written by lwc628 lwc628
0 votes
4 replies
5.2K views
Given Sequences, How To Compute A Low Complexity Score For Each Sequence?
sequence blast perl
updated by Biostar Biostar • written by lwc628 lwc628
4 votes
0 replies
121 views
Answer: A: What Are Your Most-Used Public Data Repositories?
written by lwc628 lwc628
3 votes
5 replies
17K views
How To Count The Reads Mapped To Exon And Exon-Exon Junctions?
exon sam bam reads gff
updated by m13113153781 • m13113153781 • written by lwc628 lwc628
0 votes
1 reply
0 views
Comment: C: Is It Safe To Remove Exact Duplicate Reads In The Denovo Transcriptome Assembly?
written by lwc628 lwc628
0 votes
1 reply
0 views
Comment: C: How Is It Possible For Adapter Sequence To Be Present At The Beginning Of The Re
written by lwc628 lwc628
0 votes
3 replies
4.8K views
How Is It Possible For Adapter Sequence To Be Present At The Beginning Of The Reads?
adaptor fastq
updated by Mikael Huss Mikael Huss • written by lwc628 lwc628
Latest awards to user
TODO: Awards