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Comment: Comment: User friendly (visual&interactive) VCF/BCF mining tools (2021)
2.6 years ago by desouzareis.r ▴ 280
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2.7k
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Comment: Comment: User friendly (visual&interactive) VCF/BCF mining tools (2021)
2.6 years ago by desouzareis.r ▴ 280
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1
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1.1k
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Comment: Comment: Annotate Structural variants with population specific allele frequency values
2.6 years ago by desouzareis.r ▴ 280
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1
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1.4k
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Comment: Comment: How does one harmonize WGS data with Microarray data?
2.6 years ago by desouzareis.r ▴ 280
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1.5k
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Comment: Comment: GIAB Benchmark (High Confidence) Bed Filles
2.6 years ago by desouzareis.r ▴ 280
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2
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1.5k
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Comment: Comment: GIAB Benchmark (High Confidence) Bed Filles
2.6 years ago by desouzareis.r ▴ 280
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0
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672
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Comment: Comment: Precision of variant calling (INDELs)
3.0 years ago by desouzareis.r ▴ 280
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1
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1.4k
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Comment: Comment: GATK no "SB" annotation after GenotypeGVCFs
3.1 years ago by desouzareis.r ▴ 280
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0
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1.3k
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Comment: Comment: A simple question about UCSC genome browser
3.1 years ago by desouzareis.r ▴ 280
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0
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998
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Answer: Answer: ANNOVAR doesn't recognize multiple variants at single locus
3.1 years ago by desouzareis.r ▴ 280
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16k
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Answer: Answer: Is Human_G1K_V37.Fasta Hg19?
3.1 years ago by desouzareis.r ▴ 280
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0
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747
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Answer: Comment: genotype matrix
3.1 years ago by desouzareis.r ▴ 280
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0
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1.7k
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Answer: Comment: What is the difference between breakends and breakpoints?
3.1 years ago by desouzareis.r ▴ 280
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0
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990
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Comment: Comment: search of genomic annotation databases
3.1 years ago by desouzareis.r ▴ 280
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0
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627
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Comment: Comment: Question about the DbSNP reference vcfs
3.1 years ago by desouzareis.r ▴ 280
1
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0
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1.5k
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Comment: Comment: Selecting genotypes for a specific chromosome belonging to a specific patient fr
3.1 years ago by desouzareis.r ▴ 280
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2
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1.5k
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Answer: Comment: Selecting genotypes for a specific chromosome belonging to a specific patient fr
3.1 years ago by desouzareis.r ▴ 280
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702
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Comment: C: Deletions together with SNVs on BAM files
3.1 years ago by desouzareis.r ▴ 280
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1
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1.1k
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Comment: C: Lengths of UTR3, UTR5 and ORF from gtf file
3.1 years ago by desouzareis.r ▴ 280
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1
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773
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Comment: C: Discrepancy between Genome Browser hg19 phyloP Score and that of wig data
3.1 years ago by desouzareis.r ▴ 280
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1
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788
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Comment: C: How to make paired-end sequencing multi-mapping reads have only the optimal two
3.1 years ago by desouzareis.r ▴ 280
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1
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2.2k
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Comment: C: IDT xGen Exome Research Panel v2 vs Twist Human exome core
3.1 years ago by desouzareis.r ▴ 280
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0
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945
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Comment: C: Cheat Sheet for NGS data analysis
3.1 years ago by desouzareis.r ▴ 280
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1
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5.7k
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Comment: C: How to keep only Biallelic SNP in vcf
3.1 years ago by desouzareis.r ▴ 280
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1
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5.7k
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Comment: C: How to keep only Biallelic SNP in vcf
3.1 years ago by desouzareis.r ▴ 280
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0
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2.9k
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Comment: C: How to convert plink data from 38th assembly to 37
3.1 years ago by desouzareis.r ▴ 280
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1
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725
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Comment: C: refGene Python Api
3.1 years ago by desouzareis.r ▴ 280
1
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0
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658
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Comment: C: how to get the best alignment from the sam file
3.1 years ago by desouzareis.r ▴ 280
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0
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1.8k
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Comment: C: Generate consensus from contig alignment to reference sequence
3.1 years ago by desouzareis.r ▴ 280
1
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0
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1.3k
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Comment: C: Difference between read depth, allelic depth and bam readcounts
3.1 years ago by desouzareis.r ▴ 280
2
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0
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2.0k
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Comment: C: Effect of removing secondary/supplementary alignments from BAM file?
3.1 years ago by desouzareis.r ▴ 280
1
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1
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2.0k
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Answer: C: Effect of removing secondary/supplementary alignments from BAM file?
3.1 years ago by desouzareis.r ▴ 280
1
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2
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954
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Comment: C: extract region.txt from bam file
3.1 years ago by desouzareis.r ▴ 280
3
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1
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3.1k
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Answer: A: Can't create tabix index of the bed file
3.1 years ago by desouzareis.r ▴ 280
1
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1
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974
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Comment: C: chr20_KI270871v1_alt in HG38 Broad Variant and Blacklist regions
3.1 years ago by desouzareis.r ▴ 280
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1
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996
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Comment: C: qiaseq panel fastq to vcf
3.1 years ago by desouzareis.r ▴ 280
1
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2
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996
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Comment: C: qiaseq panel fastq to vcf
3.1 years ago by desouzareis.r ▴ 280
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0
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464
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Comment: C: How will the fusion sequence looks like in RNA level
3.1 years ago by desouzareis.r ▴ 280
1
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1
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679
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Comment: C: Minimum overlap when comparing BED files
3.1 years ago by desouzareis.r ▴ 280
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0
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700
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Comment: C: Query regarding variant calling and reporting
3.2 years ago by desouzareis.r ▴ 280
1
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0
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895
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Comment: C: Data access through python
3.2 years ago by desouzareis.r ▴ 280
1
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0
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768
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Comment: C: how to determine low quality variants in vcf files
3.2 years ago by desouzareis.r ▴ 280
0
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1
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700
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Comment: C: Query regarding variant calling and reporting
3.2 years ago by desouzareis.r ▴ 280
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0
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470
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Comment: C: tool for visualizing small sets of genes
3.2 years ago by desouzareis.r ▴ 280
0
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0
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674
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Comment: C: Common SNPs (UCSC genome browser)
3.2 years ago by desouzareis.r ▴ 280
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0
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2.9k
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Comment: C: Is there any method to convert a text file to VCF format?
3.2 years ago by desouzareis.r ▴ 280
1
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1
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11k
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Comment: C: Correct way to calculate VAF (Variant allele fraction) from a VCF file
3.2 years ago by desouzareis.r ▴ 280
0
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0
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977
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Comment: C: fastqc report and quality check
3.2 years ago by desouzareis.r ▴ 280
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0
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966
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Comment: C: which tool should be used to call the genotype?
3.2 years ago by desouzareis.r ▴ 280
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0
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1.6k
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Comment: C: Converting Bigwiggle (.bw) to bed
3.2 years ago by desouzareis.r ▴ 280
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